reorganization of sources, moving cmt pertaining structures into HEP folder
This commit is contained in:
AndreaRigoni
323
src/Vtk/HEP/MuonTomography/vtkVoxRaytracerRepresentation.cpp
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323
src/Vtk/HEP/MuonTomography/vtkVoxRaytracerRepresentation.cpp
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/*//////////////////////////////////////////////////////////////////////////////
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// CMT Cosmic Muon Tomography project //////////////////////////////////////////
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////////////////////////////////////////////////////////////////////////////////
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Copyright (c) 2014, Universita' degli Studi di Padova, INFN sez. di Padova
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All rights reserved
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Authors: Andrea Rigoni Garola < andrea.rigoni@pd.infn.it >
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------------------------------------------------------------------
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This library is free software; you can redistribute it and/or
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modify it under the terms of the GNU Lesser General Public
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License as published by the Free Software Foundation; either
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version 3.0 of the License, or (at your option) any later version.
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This library is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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Lesser General Public License for more details.
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You should have received a copy of the GNU Lesser General Public
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License along with this library.
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//////////////////////////////////////////////////////////////////////////////*/
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#ifdef HAVE_CONFIG_H
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#include "config.h"
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#endif
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#include "Vtk/HEP/MuonTomography/vtkVoxRaytracerRepresentation.h"
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#include "Math/VoxRaytracer.h"
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// #include "Vtk/HEP/Detectors/vtkMuonEvent.h"
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#include "Vtk/HEP/Detectors/vtkMuonScatter.h"
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namespace uLib {
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namespace Vtk {
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////////////////////////////////////////////////////////////////////////////////
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////// VOX RAYTRACER REPRESENTATION ///////////////////////////////////////////
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////////////////////////////////////////////////////////////////////////////////
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vtkVoxRaytracerRepresentation::vtkVoxRaytracerRepresentation(Content &content)
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: m_Content(&content), m_Assembly(vtkAssembly::New()),
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m_Sphere1(vtkSphereSource::New()), m_Sphere2(vtkSphereSource::New()),
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m_Line1(vtkLineSource::New()), m_Line2(vtkLineSource::New()),
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m_Line3(vtkLineSource::New()), m_RayLine(vtkAppendPolyData::New()),
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m_RayLineActor(vtkActor::New()),
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m_RayRepresentation(vtkAppendPolyData::New()),
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m_RayRepresentationActor(vtkActor::New()),
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m_Transform(vtkTransform::New()) {
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default_radius = content.GetImage()->GetSpacing()(0) / 4;
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m_Sphere1->SetRadius(default_radius);
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m_Sphere2->SetRadius(default_radius);
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m_SelectedElement = m_RayLine;
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InstallPipe();
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}
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vtkVoxRaytracerRepresentation::~vtkVoxRaytracerRepresentation() {
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m_Assembly->Delete();
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m_RayLine->Delete();
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m_RayLineActor->Delete();
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m_RayRepresentationActor->Delete();
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m_Transform->Delete();
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}
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VoxRaytracer *vtkVoxRaytracerRepresentation::GetRaytracerAlgorithm() {
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return m_Content;
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}
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vtkProp *vtkVoxRaytracerRepresentation::GetProp() { return m_Assembly; }
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vtkPolyData *vtkVoxRaytracerRepresentation::GetPolyData() const {
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std::cout << "get Raytracer polydata\n";
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m_SelectedElement->Update();
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return m_SelectedElement->GetOutput();
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}
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void vtkVoxRaytracerRepresentation::SetRepresentationElements(
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vtkVoxRaytracerRepresentation::RepresentationElements el) {
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switch (el) {
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case Vtk::vtkVoxRaytracerRepresentation::RayElements:
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m_SelectedElement = m_RayLine;
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break;
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case Vtk::vtkVoxRaytracerRepresentation::VoxelsElements:
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m_SelectedElement = m_RayRepresentation;
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break;
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default:
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m_SelectedElement = m_RayLine;
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break;
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}
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}
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void vtkVoxRaytracerRepresentation::SetMuon(MuonScatter &muon) {
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HPoint3f pt1, pt2, src;
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src = muon.LineIn().origin;
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m_Content->GetEntryPoint(muon.LineIn(), pt1);
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m_Sphere1->SetCenter(pt1(0), pt1(1), pt1(2));
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m_Line1->SetPoint1(src(0), src(1), src(2));
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m_Line1->SetPoint2(pt1(0), pt1(1), pt1(2));
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HLine3f line_out = muon.LineOut();
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src = line_out.origin;
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float *direction = line_out.direction.data();
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for (int i = 0; i < 3; ++i)
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direction[i] *= -1;
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m_Content->GetEntryPoint(line_out, pt2);
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m_Sphere2->SetCenter(pt2(0), pt2(1), pt2(2));
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m_Line2->SetPoint1(src(0), src(1), src(2));
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m_Line2->SetPoint2(pt2(0), pt2(1), pt2(2));
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m_Line3->SetPoint1(pt1(0), pt1(1), pt1(2));
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m_Line3->SetPoint2(pt2(0), pt2(1), pt2(2));
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vtkSmartPointer<vtkPoints> points = vtkSmartPointer<vtkPoints>::New();
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points->InsertNextPoint(pt1(0), pt1(1), pt1(2));
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points->InsertNextPoint(pt2(0), pt2(1), pt2(2));
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vtkSmartPointer<vtkCellArray> lines = vtkSmartPointer<vtkCellArray>::New();
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vtkSmartPointer<vtkLine> line = vtkSmartPointer<vtkLine>::New();
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line->GetPointIds()->SetId(0, 0);
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line->GetPointIds()->SetId(1, 1);
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lines->InsertNextCell(line);
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vtkSmartPointer<vtkPolyData> linesPolyData =
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vtkSmartPointer<vtkPolyData>::New();
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linesPolyData->SetPoints(points);
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linesPolyData->SetLines(lines);
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m_RayLine->RemoveAllInputs();
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#if VTK_MAJOR_VERSION <= 5
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m_RayLine->AddInputConnection(linesPolyData->GetProducerPort());
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#else
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m_RayLine->AddInputData(linesPolyData);
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#endif
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m_RayLine->AddInputConnection(m_Line1->GetOutputPort());
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m_RayLine->AddInputConnection(m_Sphere1->GetOutputPort());
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m_RayLine->AddInputConnection(m_Line2->GetOutputPort());
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m_RayLine->AddInputConnection(m_Sphere2->GetOutputPort());
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vtkSmartPointer<vtkMatrix4x4> vmat = vtkSmartPointer<vtkMatrix4x4>::New();
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Matrix4f mat = m_Content->GetImage()->GetWorldMatrix();
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for (int i = 0; i < 4; ++i)
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for (int j = 0; j < 4; ++j)
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vmat->SetElement(i, j, mat(i, j));
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m_Transform->SetMatrix(vmat);
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this->SetRay(pt1, pt2);
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}
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void vtkVoxRaytracerRepresentation::SetMuon(MuonScatter &muon, HPoint3f poca) {
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HPoint3f pt1, pt2, src;
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src = muon.LineIn().origin;
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m_Content->GetEntryPoint(muon.LineIn(), pt1);
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m_Sphere1->SetCenter(pt1(0), pt1(1), pt1(2));
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m_Line1->SetPoint1(src(0), src(1), src(2));
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m_Line1->SetPoint2(pt1(0), pt1(1), pt1(2));
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HLine3f line_out = muon.LineOut();
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src = line_out.origin;
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float *direction = line_out.direction.data();
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for (int i = 0; i < 3; ++i)
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direction[i] *= -1;
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m_Content->GetEntryPoint(line_out, pt2);
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m_Sphere2->SetCenter(pt2(0), pt2(1), pt2(2));
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m_Line2->SetPoint1(src(0), src(1), src(2));
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m_Line2->SetPoint2(pt2(0), pt2(1), pt2(2));
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m_Line3->SetPoint1(pt1(0), pt1(1), pt1(2));
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m_Line3->SetPoint2(pt2(0), pt2(1), pt2(2));
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vtkSmartPointer<vtkPoints> points = vtkSmartPointer<vtkPoints>::New();
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points->InsertNextPoint(pt1(0), pt1(1), pt1(2));
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points->InsertNextPoint(poca(0), poca(1), poca(2));
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points->InsertNextPoint(pt2(0), pt2(1), pt2(2));
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vtkSmartPointer<vtkCellArray> lines = vtkSmartPointer<vtkCellArray>::New();
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for (unsigned int i = 0; i < 2; i++) {
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vtkSmartPointer<vtkLine> line = vtkSmartPointer<vtkLine>::New();
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line->GetPointIds()->SetId(0, i);
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line->GetPointIds()->SetId(1, i + 1);
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lines->InsertNextCell(line);
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}
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vtkSmartPointer<vtkPolyData> linesPolyData =
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vtkSmartPointer<vtkPolyData>::New();
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linesPolyData->SetPoints(points);
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linesPolyData->SetLines(lines);
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m_RayLine->RemoveAllInputs();
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#if VTK_MAJOR_VERSION <= 5
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m_RayLine->AddInputConnection(linesPolyData->GetProducerPort());
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#else
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m_RayLine->AddInputData(linesPolyData);
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#endif
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m_RayLine->AddInputConnection(m_Line1->GetOutputPort());
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m_RayLine->AddInputConnection(m_Sphere1->GetOutputPort());
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m_RayLine->AddInputConnection(m_Line2->GetOutputPort());
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m_RayLine->AddInputConnection(m_Sphere2->GetOutputPort());
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vtkSmartPointer<vtkSphereSource> poca_sphere =
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vtkSmartPointer<vtkSphereSource>::New();
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poca_sphere->SetRadius(default_radius);
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poca_sphere->SetCenter(poca(0), poca(1), poca(2));
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m_RayLine->AddInputConnection(poca_sphere->GetOutputPort());
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vtkSmartPointer<vtkMatrix4x4> vmat = vtkSmartPointer<vtkMatrix4x4>::New();
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Matrix4f mat = m_Content->GetImage()->GetWorldMatrix();
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for (int i = 0; i < 4; ++i)
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for (int j = 0; j < 4; ++j)
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vmat->SetElement(i, j, mat(i, j));
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m_Transform->SetMatrix(vmat);
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if (m_Content->GetImage()->IsInsideBounds(poca))
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this->SetRay(pt1, poca, pt2);
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else
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this->SetRay(pt1, pt2);
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}
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void vtkVoxRaytracerRepresentation::SetMuon(vtkMuonScatter &muon) {
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HPoint3f poca = muon.GetPocaPoint();
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MuonScatter &mu = muon.GetContent();
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this->SetMuon(mu, poca);
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}
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VoxRaytracer::RayData vtkVoxRaytracerRepresentation::GetRay() { return m_Ray; }
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void vtkVoxRaytracerRepresentation::SetRay(HPoint3f in, HPoint3f out) {
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m_Ray = m_Content->TraceBetweenPoints(in, out);
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this->SetRay(&m_Ray);
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}
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void vtkVoxRaytracerRepresentation::SetRay(HPoint3f in, HPoint3f mid,
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HPoint3f out) {
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m_Ray = m_Content->TraceBetweenPoints(in, mid);
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m_Ray.AppendRay(m_Content->TraceBetweenPoints(mid, out));
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this->SetRay(&m_Ray);
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}
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void vtkVoxRaytracerRepresentation::SetRay(VoxRaytracer::RayData *ray) {
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vtkAppendPolyData *appender = m_RayRepresentation;
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appender->RemoveAllInputs();
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for (size_t i = 0; i < ray->Count(); ++i) {
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int id = ray->Data().at(i).vox_id;
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Vector3i idv = m_Content->GetImage()->UnMap(id);
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vtkSmartPointer<vtkCubeSource> cube = vtkSmartPointer<vtkCubeSource>::New();
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cube->SetBounds(idv(0), idv(0) + 1, idv(1), idv(1) + 1, idv(2), idv(2) + 1);
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#if VTK_MAJOR_VERSION <= 5
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cube->Update();
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appender->AddInput(cube->GetOutput());
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#else
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appender->AddInputData(cube->GetOutput());
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#endif
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}
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}
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void vtkVoxRaytracerRepresentation::SetVoxelsColor(Vector4f rgba) {
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this->SetColor(m_RayRepresentationActor, rgba);
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}
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void vtkVoxRaytracerRepresentation::SetRayColor(Vector4f rgba) {
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this->SetColor(m_RayLineActor, rgba);
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}
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void vtkVoxRaytracerRepresentation::SetColor(vtkActor *actor, Vector4f rgba) {
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if (!actor)
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return;
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vtkProperty *pr = actor->GetProperty();
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pr->SetDiffuseColor(rgba(0), rgba(1), rgba(2));
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pr->SetOpacity(rgba(3));
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pr->SetDiffuse(1);
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}
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void vtkVoxRaytracerRepresentation::InstallPipe() {
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vtkSmartPointer<vtkAppendPolyData> append =
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vtkSmartPointer<vtkAppendPolyData>::New();
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append->AddInputConnection(m_Sphere1->GetOutputPort());
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append->AddInputConnection(m_Sphere2->GetOutputPort());
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append->AddInputConnection(m_Line1->GetOutputPort());
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append->AddInputConnection(m_Line2->GetOutputPort());
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vtkSmartPointer<vtkPolyDataMapper> mapper =
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vtkSmartPointer<vtkPolyDataMapper>::New();
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mapper->SetInputConnection(append->GetOutputPort());
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vtkSmartPointer<vtkActor> actor = vtkActor::New();
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actor->SetMapper(mapper);
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actor->GetProperty()->SetColor(0.6, 0.6, 1);
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this->SetProp(actor);
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mapper = vtkSmartPointer<vtkPolyDataMapper>::New();
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mapper->SetInputConnection(m_RayLine->GetOutputPort());
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m_RayLineActor->SetMapper(mapper);
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m_RayLineActor->GetProperty()->SetColor(1, 0, 0);
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this->SetProp(m_RayLineActor);
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vtkSmartPointer<vtkTransformPolyDataFilter> polyfilter =
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vtkSmartPointer<vtkTransformPolyDataFilter>::New();
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polyfilter->SetInputConnection(m_RayRepresentation->GetOutputPort());
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polyfilter->SetTransform(m_Transform);
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mapper = vtkSmartPointer<vtkPolyDataMapper>::New();
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mapper->SetInputConnection(polyfilter->GetOutputPort());
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vtkActor *vra = m_RayRepresentationActor;
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vra->SetMapper(mapper);
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vra->GetProperty()->SetOpacity(0.2);
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vra->GetProperty()->SetEdgeVisibility(true);
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vra->GetProperty()->SetColor(0.5, 0.5, 0.5);
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this->SetProp(vra);
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}
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} // namespace Vtk
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} // namespace uLib
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