24 Commits

Author SHA1 Message Date
AndreaRigoni
c04722c2bb refactor: reformat type introspection code and remove ObjectProps system. 2026-02-21 10:45:25 +00:00
AndreaRigoni
8566ceb662 feat: add condaenv.yml for environment setup and update README.md with detailed build instructions. 2026-02-20 18:05:40 +00:00
AndreaRigoni
5ae2e106ab added conanfile 2026-02-20 17:27:30 +00:00
c526f61f8c Merge pull request #3 from OpenCMT/andrea-dev
fix mismatch Origin - Position
2025-09-25 17:38:45 +02:00
AndreaRigoni
54997fe0ac fix mismatch Origin - Position 2025-09-25 17:34:23 +02:00
94bad596ed Merge pull request #2 from OpenCMT/andrea-dev
fix export to Vti
2025-09-23 18:52:54 +02:00
AndreaRigoni
fc909da400 fix export to Vti 2025-09-23 18:21:11 +02:00
b0240dc807 Merge pull request #1 from OpenCMT/andrea-dev
Andrea dev
2025-09-18 13:12:12 +02:00
AndreaRigoni
591cc9d8bc add version 0.6 - make external build possible 2025-09-05 18:04:54 +02:00
AndreaRigoni
2e401f6fc5 add posibility to compile in build directory 2025-09-04 16:12:38 +02:00
AndreaRigoni
91abd56587 fix Root needs for C++17 2025-09-04 16:11:57 +02:00
AndreaRigoni
01ff8a0a0d update 2025-09-02 13:01:55 +02:00
AndreaRigoni
b86e27a9c4 add VTK save early 2025-09-02 12:42:46 +02:00
Paolo Andreetto
820730bc84 New root dicts 2023-09-01 14:14:06 +02:00
Paolo Andreetto
06c363ab8c Workaround for CentOS7 2023-04-04 16:31:30 +02:00
Paolo Andreetto
b7c775ee35 Error handling 2023-02-22 11:20:56 +01:00
Paolo Andreetto
7bc4932d09 Missing component for VTK 2023-02-20 16:10:10 +01:00
Paolo Andreetto
8832f47e75 Fixed build for VTK on alma9 2023-02-20 16:08:30 +01:00
Paolo Andreetto
043a44150c New writer class for the skin detector 2023-02-17 14:35:31 +01:00
Paolo Andreetto
fce2a39393 Changed version 2023-01-17 10:36:34 +01:00
Paolo Andreetto
d223a3a308 Restored classes for Castor 2023-01-17 10:36:05 +01:00
Paolo Andreetto
843a2d69cf Removed structures for Castor and muBlast 2020-09-29 15:23:08 +02:00
Paolo Andreetto
a60a21bfe4 Massive reorganization of CMake files 2020-06-29 14:44:26 +02:00
Paolo Andreetto
9d899928b8 Bug fixed for MacOD: removed macro 2020-04-28 13:34:07 +02:00
57 changed files with 2008 additions and 2063 deletions

2
.gitignore vendored
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@@ -1,3 +1,3 @@
CMakeFiles/
build/
.cache/

8
.vscode/settings.json vendored Normal file
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@@ -0,0 +1,8 @@
{
"clangd.fallbackFlags": [
"-I${workspaceFolder}/src",
"-I/home/share/micromamba/envs/mutom/include",
"-I/home/rigoni/.conan2/p/eigen5481853932f72/p/include/eigen3"
],
"clangd.semanticHighlighting.enable": true
}

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@@ -1,116 +0,0 @@
Summary: Cosmic Muon Tomography core libraries
Name: cmt-ulib
Version: @PKGVERSION@
Release: @PKGRELEASE@%{?dist}
License: EUROPEAN UNION PUBLIC LICENCE v. 1.2
Vendor: INFN
URL: https://github.com/OpenCMT/uLib
Group: Development/Libraries
BuildArch: %{_arch}
%if %{?rhel}%{!?rhel:0} >= 8
BuildRequires: cmake
%else
BuildRequires: cmake3
%endif
BuildRequires: doxygen
BuildRequires: boost-devel
BuildRequires: eigen3-devel
BuildRequires: vtk-devel
BuildRequires: readline-devel
BuildRequires: pcl-devel
BuildRequires: root-geom
BuildRequires: root-genvector
BuildRequires: root-smatrix
BuildRequires: root-montecarlo-eg
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
AutoReqProv: yes
Source: %{name}-%{version}.tar.gz
%description
This package contains the base toolkit library for Cosmic Muon Tomography reconstruction,
analysis and imaging software Developed by University of Padova and INFN Sezione di Padova Italy
%global _ulibpkgname mutom
%global _ulibcmakedir %{_libdir}/cmake/%{_ulibpkgname}
%prep
%setup -c
rm -rf %{buildroot}
mkdir -p %{buildroot}
%build
mkdir %{_builddir}/%{name}-%{version}/build
cd %{_builddir}/%{name}-%{version}/build
%cmake -DCMAKE_INSTALL_PREFIX=%{buildroot}%{_prefix} \
-DCMAKE_BUILD_TYPE=RelWithDebInfo \
-DPACKAGE_NAME=%{_ulibpkgname} \
-DPACKAGE_INSTALL_LIB_DIR=%{buildroot}%{_libdir} \
-DPACKAGE_INSTALL_INC_DIR=%{buildroot}%{_includedir}/%{_ulibpkgname} \
-DPACKAGE_INSTALL_CMAKE_DIR=%{buildroot}%{_ulibcmakedir} \
-DNODOXYGEN=ON \
%{_builddir}/%{name}-%{version}
make %{?_smp_mflags}
%install
cd %{_builddir}/%{name}-%{version}/build
make install
sed -i 's|%{buildroot}/usr|%{_prefix}|g' %{buildroot}%{_ulibcmakedir}/uLibTargets.cmake
sed -i 's|%{buildroot}/usr|%{_prefix}|g' %{buildroot}%{_ulibcmakedir}/uLibTargets-relwithdebinfo.cmake
%clean
rm -rf %{buildroot}
%files
%defattr(-,root,root)
%{_libdir}/libmutom*.so.0.2
%{_libdir}/uLibRootDict_rdict.pcm
%package devel
Summary: Cosmic Muon Tomography core libraries, development files
Requires: %{name}
Requires: boost-devel
Requires: eigen3-devel
Requires: vtk-devel
Requires: readline-devel
Requires: pcl-devel
Requires: root-geom
Requires: root-genvector
Requires: root-smatrix
Requires: root-montecarlo-eg
%description devel
This package contains the base toolkit library for Cosmic Muon Tomography reconstruction,
analysis and imaging software Developed by University of Padova and INFN Sezione di Padova Italy
%files devel
%defattr(-,root,root)
%dir %{_ulibcmakedir}
/usr/bin/uLib_config
%{_libdir}/libmutom*.so
%{_ulibcmakedir}/*.cmake
%dir %{_includedir}/%{_ulibpkgname}
%dir %{_includedir}/%{_ulibpkgname}/Core
%dir %{_includedir}/%{_ulibpkgname}/Math
%dir %{_includedir}/%{_ulibpkgname}/Root
%dir %{_includedir}/%{_ulibpkgname}/Detectors
%dir %{_includedir}/%{_ulibpkgname}/Vtk
%{_includedir}/%{_ulibpkgname}/*.h
%{_includedir}/%{_ulibpkgname}/Core/*.h
%{_includedir}/%{_ulibpkgname}/Math/*.h
%{_includedir}/%{_ulibpkgname}/Math/*.hpp
%{_includedir}/%{_ulibpkgname}/Root/*.h
%{_includedir}/%{_ulibpkgname}/Detectors/*.h
%{_includedir}/%{_ulibpkgname}/Vtk/*.h
%changelog
* Tue Dec 04 2018 Paolo Andreetto <paolo.andreetto@pd.infn.it> - 0.2.1-1
- Repackaging for CentOS 7

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@@ -15,16 +15,16 @@ set(EXECUTABLE_OUTPUT_PATH ${PROJECT_BINARY_DIR}/bin CACHE PATH "build path for
mark_as_advanced(EXECUTABLE_OUTPUT_PATH)
## Install directories ##
set(PACKAGE_INSTALL_BIN_DIR bin CACHE PATH "Installation directory for executables")
set(PACKAGE_INSTALL_LIB_DIR lib/${PACKAGE_NAME} CACHE PATH "Installation directory for libraries")
set(PACKAGE_INSTALL_INC_DIR include/${PACKAGE_NAME} CACHE PATH "Installation directory for headers")
set(PACKAGE_INSTALL_DATA_DIR share/${PACKAGE_NAME} CACHE PATH "Installation directory for data files")
set(INSTALL_BIN_DIR bin CACHE PATH "Installation directory for executables")
set(INSTALL_LIB_DIR lib/${PACKAGE_NAME} CACHE PATH "Installation directory for libraries")
set(INSTALL_INC_DIR include/${PACKAGE_NAME} CACHE PATH "Installation directory for headers")
set(INSTALL_DATA_DIR share/${PACKAGE_NAME} CACHE PATH "Installation directory for data files")
if(WIN32 AND NOT CYGWIN)
set(DEF_INSTALL_CMAKE_DIR CMake)
else()
set(DEF_INSTALL_CMAKE_DIR lib/cmake/${PACKAGE_NAME})
endif()
set(PACKAGE_INSTALL_CMAKE_DIR ${DEF_INSTALL_CMAKE_DIR} CACHE PATH "Installation directory for CMake files")
set(INSTALL_CMAKE_DIR ${DEF_INSTALL_CMAKE_DIR} CACHE PATH "Installation directory for CMake files")
# Make relative paths absolute (needed later on)
foreach(p LIB BIN INC DATA CMAKE)
@@ -58,7 +58,7 @@ endif()
set(CMAKE_CXX_WARNING_OPTION "" CACHE STRING "Warning level -WAll to verbose all warnings")
set(CMAKE_VERBOSE_MAKEFILE FALSE CACHE STRING "Verbose compile output switch")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++0x ${CMAKE_CXX_WARNING_OPTION}")
# set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++0x ${CMAKE_CXX_WARNING_OPTION}")

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@@ -13,7 +13,7 @@ set(Boost_USE_STATIC_LIBS OFF)
set(Boost_USE_MULTITHREADED ON)
set(Boost_USE_STATIC_RUNTIME OFF)
find_package(Boost 1.45.0 COMPONENTS serialization signals program_options REQUIRED)
find_package(Boost 1.45.0 COMPONENTS program_options REQUIRED)
if(Boost_FOUND)
set(HAVE_BOOST true)
endif(Boost_FOUND)

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@@ -1,34 +0,0 @@
# Target for RPMs creation
set(PKGREL 1 CACHE STRING "Package build number")
set(ITEMS_FOR_SOURCE AUTHORS
CMakeConfig.in.h
CMakePkgConfig.pc.in
test.cpp
uLibConfig.cmake.in
uLib.creator
ulib.h
vtk_test.cpp
CMake
CMakeLists.txt
Jenkinsfile
src
uLib.config
uLibConfigVersion.cmake.in
uLib.files
uLib.includes)
add_custom_target(rpm
COMMAND mkdir -p ${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/BUILD
${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/RPMS
${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/SOURCES
${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/SPECS
${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/SRPMS
COMMAND tar -zcf ${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/SOURCES/cmt-ulib-${PACKAGE_VERSION}.tar.gz ${ITEMS_FOR_SOURCE}
COMMAND sed -e 's|@PKGVERSION@|${PACKAGE_VERSION}|g'
-e 's|@PKGRELEASE@|${PKGREL}|g'
CMake/cmt-ulib.spec.in > ${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/SPECS/cmt-ulib.spec
COMMAND QA_SKIP_BUILD_ROOT=1 rpmbuild -ba --define '_topdir ${CMAKE_CURRENT_BINARY_DIR}/rpmbuild'
${CMAKE_CURRENT_BINARY_DIR}/rpmbuild/SPECS/cmt-ulib.spec
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})

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@@ -41,15 +41,15 @@ macro(uLib_add_shared_library name)
install(TARGETS ${mname}
EXPORT "${PROJECT_NAME}Targets"
RUNTIME DESTINATION ${PACKAGE_INSTALL_BIN_DIR} COMPONENT bin
LIBRARY DESTINATION ${PACKAGE_INSTALL_LIB_DIR} COMPONENT lib
# PUBLIC_HEADER DESTINATION ${PACKAGE_INSTALL_INC_DIR} COMPONENT dev
RUNTIME DESTINATION ${INSTALL_BIN_DIR} COMPONENT bin
LIBRARY DESTINATION ${INSTALL_LIB_DIR} COMPONENT lib
# PUBLIC_HEADER DESTINATION ${INSTALL_INC_DIR} COMPONENT dev
)
endif(SOURCES)
if(HEADERS)
foreach(header ${HEADERS})
install(FILES ${header} DESTINATION ${PACKAGE_INSTALL_INC_DIR}/${name})
install(FILES ${header} DESTINATION ${INSTALL_INC_DIR}/${name})
endforeach(header)
endif(HEADERS)
@@ -70,7 +70,7 @@ macro(uLib_add_target name)
install(TARGETS ${name}
EXPORT "${PROJECT_NAME}Targets"
RUNTIME DESTINATION ${PACKAGE_INSTALL_BIN_DIR} COMPONENT bin
RUNTIME DESTINATION ${INSTALL_BIN_DIR} COMPONENT bin
)
ENDMACRO(uLib_add_target)

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@@ -3,7 +3,7 @@
##### CMAKE LISTS ##############################################################
################################################################################
cmake_minimum_required (VERSION 2.6)
cmake_minimum_required (VERSION 3.26)
## -------------------------------------------------------------------------- ##
@@ -11,7 +11,7 @@ project(uLib)
# The version number.
set(PROJECT_VERSION_MAJOR 0)
set(PROJECT_VERSION_MINOR 2)
set(PROJECT_VERSION_MINOR 6)
set(PROJECT_VERSION "${PROJECT_VERSION_MAJOR}.${PROJECT_VERSION_MINOR}")
set(PROJECT_SOVERSION "${PROJECT_VERSION_MAJOR}.${PROJECT_VERSION_MINOR}")
@@ -26,130 +26,245 @@ set(PACKAGE_AUTHOR "Andrea Rigoni Garola <andrea.rigoni@pd.infn.it>")
set(ULIB_CMAKE_DIR "${PROJECT_SOURCE_DIR}/CMake")
set(CMAKE_MODULE_PATH "${PROJECT_SOURCE_DIR}/CMake" ${CMAKE_MODULE_PATH})
message(STATUS "Module path: ${CMAKE_MODULE_PATH}")
include(uLibMacros)
include(uLibDebugMacro)
include(uLibTargetMacros)
#include(uLibGenerateRMake)
message(STATUS "Project name = ${PROJECT_NAME}")
message(STATUS "Package name = ${PACKAGE_NAME}")
message(STATUS "Package version = ${PACKAGE_VERSION}")
message(STATUS "Module path = ${CMAKE_MODULE_PATH}")
## GLOBALS ------------------------------------------------------------------ ##
include(uLibCommon)
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ") ## Add flags here ##
# -- move to GnuInstallDirs
# ref: https://cmake.org/cmake/help/latest/module/GNUInstallDirs.html
include(GNUInstallDirs)
set(INSTALL_INC_DIR ${CMAKE_INSTALL_INCLUDEDIR}/${PACKAGE_NAME}
CACHE PATH "Location of header files (.../include)" )
set(INSTALL_ETC_DIR ${CMAKE_INSTALL_SYSCONFDIR}/${PACKAGE_NAME}
CACHE PATH "Location of configuration files (.../etc)" )
set(INSTALL_BIN_DIR ${CMAKE_INSTALL_BINDIR}/${PACKAGE_NAME}
CACHE PATH "Location of executable files (.../bin)" )
set(INSTALL_LIB_DIR ${CMAKE_INSTALL_LIBDIR}
CACHE PATH "Location of library files (.../lib)" )
set(INSTALL_CMAKE_DIR ${CMAKE_INSTALL_LIBDIR}/cmake/${PACKAGE_NAME}
CACHE PATH "Location of cmake files (.../lib/cmake)" )
set(INSTALL_DATA_DIR ${CMAKE_INSTALL_DATADIR}/${PACKAGE_NAME}
CACHE PATH "Location of data files (.../share)" )
set(SRC_DIR ${PROJECT_SOURCE_DIR}/src)
# this is used to be exported in build target
# ( to compile against build directory instead of install )
set(ULIB_SOURCE_DIR ${PROJECT_SOURCE_DIR})
if(NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
message(STATUS "Setting build type to 'Release' as none was specified.")
set(CMAKE_BUILD_TYPE RelWithDebInfo CACHE STRING "Choose the type of build." FORCE)
set(CMAKE_EXE_LINKER_FLAGS "-Wl,--no-as-needed")
# Set the possible values of build type for cmake-gui
set_property(CACHE CMAKE_BUILD_TYPE PROPERTY
STRINGS "Debug" "Release" "MinSizeRel" "RelWithDebInfo")
endif()
set(CMAKE_CXX_WARNING_OPTION ""
CACHE STRING "Warning level -WAll to verbose all warnings")
set(CMAKE_VERBOSE_MAKEFILE FALSE
CACHE STRING "Verbose compile output switch")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${CMAKE_CXX_WARNING_OPTION}")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -UULIB_SERIALIZATION_ON -Wno-cpp")
# CTEST framework
enable_testing()
## FIND PACKAGES ------------------------------------------------------------ ##
include(uLibFindDependencies)
set(Boost_USE_STATIC_LIBS OFF)
set(Boost_USE_MULTITHREADED ON)
set(Boost_USE_STATIC_RUNTIME OFF)
message(STATUS "CMAKE_PREFIX_PATH is ${CMAKE_PREFIX_PATH}")
find_package(Boost 1.45.0 COMPONENTS program_options REQUIRED)
include_directories(${Boost_INCLUDE_DIRS})
find_package(Eigen3 CONFIG REQUIRED)
get_target_property(EIGEN3_INCLUDE_DIRS Eigen3::Eigen INTERFACE_INCLUDE_DIRECTORIES)
include_directories(${EIGEN3_INCLUDE_DIRS})
find_package(ROOT CONFIG REQUIRED)
include(${ROOT_USE_FILE})
find_package(VTK REQUIRED)
# include(${VTK_USE_FILE})
option(CENTOS_SUPPORT "VTK definitions for CentOS" OFF)
if(CENTOS_SUPPORT)
find_package(VTK CONFIG REQUIRED)
include(${VTK_USE_FILE})
else()
find_package(VTK REQUIRED
COMPONENTS CommonColor
CommonCore
FiltersCore
FiltersModeling
FiltersSources
IOLegacy
IOXML
IOXMLParser
ImagingCore
InteractionStyle
InteractionWidgets
RenderingAnnotation
RenderingContextOpenGL2
RenderingCore
RenderingFreeType
RenderingGL2PSOpenGL2
RenderingOpenGL2
RenderingVolumeOpenGL2)
endif()
set(CMAKE_REQUIRED_INCLUDES CMAKE_REQUIRED_INCLUDES math.h)
set(CMAKE_REQUIRED_LIBRARIES CMAKE_REQUIRED_LIBRARIES m)
## CONFIG ------------------------------------------------------------------- ##
include(uLibConfigHeader)
set(BOOST_PP_VARIADICS ON)
include(CheckIncludeFiles)
include(CheckFunctionExists)
include(CheckSymbolExists)
CHECK_INCLUDE_FILES(inittypes.h HAVE_INITTYPES_H)
CHECK_INCLUDE_FILES(stdbool.h HAVE_STDBOOL_H)
CHECK_INCLUDE_FILES(stdint.h HAVE_STDINT_H)
CHECK_INCLUDE_FILES(stdlib.h HAVE_STDLIB_H)
CHECK_INCLUDE_FILES(dlfcn.h HAVE_DLFCN_H)
CHECK_INCLUDE_FILES(malloc.h HAVE_MALLOC_H)
CHECK_FUNCTION_EXISTS(malloc HAVE_MALLOC)
CHECK_INCLUDE_FILES(memory.h HAVE_MEMORY_H)
CHECK_INCLUDE_FILES(math.h HAVE_MATH_H)
CHECK_FUNCTION_EXISTS(fsetround HAVE_FSETROUND)
CHECK_FUNCTION_EXISTS(floor HAVE_FLOOR)
CHECK_FUNCTION_EXISTS(pow HAVE_POW)
CHECK_FUNCTION_EXISTS(sqrt HAVE_SQRT)
CHECK_FUNCTION_EXISTS(strdup HAVE_STRDUP)
CHECK_FUNCTION_EXISTS(strstr HAVE_STRSTR)
CHECK_INCLUDE_FILES(strings.h HAVE_STRINGS_H)
CHECK_INCLUDE_FILES(string.h HAVE_STRING_H)
CHECK_INCLUDE_FILES(sys/stat.h HAVE_SYS_STAT_H)
CHECK_INCLUDE_FILES(sys/types.h HAVE_SYS_TYPES_H)
CHECK_INCLUDE_FILES(unistd.h HAVE_UNISTD_H)
CHECK_INCLUDE_FILES(assert.h HAVE_ASSERT_H)
configure_file("${PROJECT_SOURCE_DIR}/CMakeConfig.in.h"
"${PROJECT_BINARY_DIR}/config.h")
install(FILES "${PROJECT_BINARY_DIR}/config.h"
DESTINATION ${INSTALL_INC_DIR})
## ADD LIBRARIES SUBDIRECTORIES --------------------------------------------- ##
## select modules ##
set(ULIB_SELECTED_MODULES
Core
Math
Detectors
Root
)
include_directories(${PROJECT_BINARY_DIR})
include_directories(${SRC_DIR})
## uLib_add_shared_library puts names there
set(ULIB_SHARED_LIBRARIES)
## select modules ##
set(ULIB_SELECTED_MODULES)
if(ULIB_USE_VTK)
LIST(APPEND ULIB_SELECTED_MODULES Vtk)
endif(ULIB_USE_VTK)
include_directories(${SRC_DIR}/Core)
add_subdirectory(${SRC_DIR}/Core)
include_directories(${SRC_DIR}/Math)
add_subdirectory(${SRC_DIR}/Math)
include_directories(${SRC_DIR}/Detectors)
add_subdirectory(${SRC_DIR}/Detectors)
include_directories(${SRC_DIR}/Root)
add_subdirectory(${SRC_DIR}/Root)
include_directories(${SRC_DIR}/Vtk)
add_subdirectory(${SRC_DIR}/Vtk)
#add_subdirectory("${SRC_DIR}/utils/make_recipe")
## Documentation and packages
include(uLibGenerateRPMS)
include(uLibGenerateDoc)
## this gets ulib modules into a variable ##
function(uLib_modules result)
set(out)
foreach(module ${ULIB_SELECTED_MODULES})
list(APPEND out ${PACKAGE_LIBPREFIX}${module})
endforeach(module)
set(${result} "${out}" PARENT_SCOPE)
endfunction()
## ENTERING MODULES SUBDIRECTORIES ##
message("/////////// SELECTED MODULES //////////////")
foreach(module ${ULIB_SELECTED_MODULES})
message(STATUS "adding module: ${module}")
set( uLib-module ${module})
include_directories(${SRC_DIR}/${module})
add_subdirectory(${SRC_DIR}/${module})
endforeach(module)
#include(uLibGenerateDoc)
## UTILITIES ##
add_subdirectory("${SRC_DIR}/utils/make_recipe")
#add_subdirectory("${SRC_DIR}/utils/make_recipe")
## INSTALLS AND EXPORTS ----------------------------------------------------- ##
#export(PACKAGE uLib)
export(PACKAGE ULIB)
export(TARGETS ${ULIB_SHARED_LIBRARIES} ${ULIB_EXPORTED_TARGETS}
FILE "${PROJECT_BINARY_DIR}/uLibTargets.cmake" )
#export(TARGETS ${ULIB_EXPORTED_TARGETS}
# FILE "${PROJECT_BINARY_DIR}/uLibExeTargets.cmake" )
#export(PACKAGE ULIB)
#export(TARGETS ${ULIB_SHARED_LIBRARIES} ${ULIB_EXPORTED_TARGETS}
# FILE "${PROJECT_BINARY_DIR}/uLibTargets.cmake" )
# Create the FooBarConfig.cmake and FooBarConfigVersion files
file(RELATIVE_PATH REL_INCLUDE_DIR "${PACKAGE_INSTALL_CMAKE_DIR}"
"${PACKAGE_INSTALL_INC_DIR}")
# file(RELATIVE_PATH REL_INCLUDE_DIR "${INSTALL_CMAKE_DIR}"
# "${INSTALL_INC_DIR}")
# ... for the build tree
set(CONF_INCLUDE_DIRS "${PROJECT_SOURCE_DIR}/src" "${PROJECT_BINARY_DIR}")
configure_file(uLibConfig.cmake.in
"${PROJECT_BINARY_DIR}/uLibConfig.cmake" @ONLY)
#set(CONF_INCLUDE_DIRS "${PROJECT_SOURCE_DIR}/src" "${PROJECT_BINARY_DIR}")
#configure_file(uLibConfig.cmake.in
# "${PROJECT_BINARY_DIR}/uLibConfig.cmake" @ONLY)
# ... for the install tree
set(CONF_INCLUDE_DIRS "\${ULIB_CMAKE_DIR}/${REL_INCLUDE_DIR}")
configure_file(uLibConfig.cmake.in
"${PROJECT_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/uLibConfig.cmake" @ONLY)
# [ removed for the configure_config_file ]
# configure_file(uLibConfig.cmake.in
# "${PROJECT_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/uLibConfig.cmake"
# @ONLY)
# ... for both
configure_file(uLibConfigVersion.cmake.in
"${PROJECT_BINARY_DIR}/uLibConfigVersion.cmake" @ONLY)
"${PROJECT_BINARY_DIR}/uLibConfigVersion.cmake" @ONLY)
install(FILES "${PROJECT_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/uLibConfig.cmake"
# from CMake 3.x configure file shall be created using a dedicated function
# see: https://cmake.org/cmake/help/latest/module/CMakePackageConfigHelpers.html
#
include(CMakePackageConfigHelpers)
configure_package_config_file(uLibConfig.cmake.in
"${PROJECT_BINARY_DIR}/uLibConfig.cmake"
INSTALL_DESTINATION ${INSTALL_CMAKE_DIR}
PATH_VARS
INSTALL_LIB_DIR
INSTALL_INC_DIR
INSTALL_BIN_DIR
INSTALL_CMAKE_DIR
INSTALL_ETC_DIR
INSTALL_DATA_DIR
ULIB_SOURCE_DIR
ULIB_SHARED_LIBRARIES
# NO_SET_AND_CHECK_MACRO
# NO_CHECK_REQUIRED_COMPONENTS_MACRO
)
install(FILES "${PROJECT_BINARY_DIR}/uLibConfig.cmake"
"${PROJECT_BINARY_DIR}/uLibConfigVersion.cmake"
"${PROJECT_SOURCE_DIR}/CMake/FindReadLine.cmake"
"${PROJECT_SOURCE_DIR}/CMake/FindROOT.cmake"
"${PROJECT_SOURCE_DIR}/CMake/FindROOTv6.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibCommon.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibConfigHeader.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibDebugMacro.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibFindDependencies.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibGenerateDoc.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibGenerateRMake.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibGenerateRPMS.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibMacros.cmake"
"${PROJECT_SOURCE_DIR}/CMake/uLibTargetMacros.cmake"
DESTINATION "${PACKAGE_INSTALL_CMAKE_DIR}"
DESTINATION "${INSTALL_CMAKE_DIR}"
COMPONENT dev)
# this is a special target file for the build tree
# it is used also to identify if we are using a build direcory
# to link a project against uLib. see: uLibConfig.cmake ( IF )
export (TARGETS ${ULIB_SHARED_LIBRARIES}
FILE "${PROJECT_BINARY_DIR}/uLibTargets-build.cmake"
# NAMESPACE "uLib::"
)
# Install the export set for use with the install-tree
install(EXPORT "${PROJECT_NAME}Targets" DESTINATION
"${PACKAGE_INSTALL_CMAKE_DIR}" COMPONENT dev)
install(FILES ${PROJECT_SOURCE_DIR}/ulib.h DESTINATION ${PACKAGE_INSTALL_INC_DIR})
# TODO clean also subdirectories
add_custom_target(clean-cmake-files
COMMAND ${CMAKE_COMMAND} -P ${ULIB_CMAKE_DIR}/clean-all.cmake
)
install(EXPORT "uLibTargets"
FILE "uLibTargets.cmake"
DESTINATION "${INSTALL_CMAKE_DIR}"
COMPONENT dev)

9
CMakeUserPresets.json Normal file
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@@ -0,0 +1,9 @@
{
"version": 4,
"vendor": {
"conan": {}
},
"include": [
"build/CMakePresets.json"
]
}

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@@ -7,3 +7,57 @@ base toolkit library
CMT Cosmic Muon Tomography reconstruction, analysis and imaging software
Developed by University of Padova and INFN Sezione di Padova Italy
## Build Instructions
This project relies on `conan` (v2) for dependency management (Eigen3, Boost) and `cmake` for configuration. VTK is provided through the micromamba/conda-forge environment.
### Prerequisites
This project requires a `conda` or `micromamba` environment containing the necessary global tools like **ROOT**, **VTK**, and **Conan** (v2). We provide a `condaenv.yml` file to quickly build this environment.
#### Installing Micromamba (Optional)
If you do not have `conda` installed, `micromamba` is a fast and lightweight alternative. You can install it on Linux via:
```bash
"${SHELL}" <(curl -L micro.mamba.pm/install.sh)
```
#### Creating the Environment
You can create and activate the environment using either `micromamba` or `conda`.
**Using Micromamba:**
```bash
micromamba env create -f condaenv.yml
micromamba activate mutom
```
**Using Conda:**
```bash
conda env create -f condaenv.yml
conda activate mutom
```
### Configure and Build
1. **Configure Conan profile (if you haven't yet on your machine):**
```bash
conan profile detect
```
2. **Install Conan dependencies:**
```bash
conan install . --output-folder=build --build=missing
```
3. **Configure the project with CMake:**
```bash
cmake --preset conan-release
```
*(Alternatively: `cd build && cmake .. -DCMAKE_TOOLCHAIN_FILE=conan_toolchain.cmake -DCMAKE_BUILD_TYPE=Release`)*
4. **Build the project:**
```bash
cmake --build build -j10
```

36
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@@ -0,0 +1,36 @@
make: Entering directory '/home/rigoni/devel/cmt/ulib/build'
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/VoxImage.cpp.o
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/TriangleMesh.cpp.o
[ 30%] Building CXX object src/Core/CMakeFiles/mutomCore.dir/Options.cpp.o
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/Dense.cpp.o
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/StructuredGrid.cpp.o
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/VoxRaytracer.cpp.o
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/StructuredData.cpp.o
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/Structured2DGrid.cpp.o
[ 30%] Building CXX object src/Math/CMakeFiles/mutomMath.dir/Structured4DGrid.cpp.o
[ 33%] Linking CXX shared library libmutomCore.so
[ 33%] Built target mutomCore
[ 36%] Linking CXX shared library libmutomMath.so
[ 36%] Built target mutomMath
[ 63%] Building CXX object src/Vtk/CMakeFiles/mutomVtk.dir/vtkContainerBox.cpp.o
[ 63%] Building CXX object src/Vtk/CMakeFiles/mutomVtk.dir/uLibVtkInterface.cxx.o
[ 63%] Building CXX object src/Vtk/CMakeFiles/mutomVtk.dir/vtkStructuredGrid.cpp.o
[ 63%] Building CXX object src/Vtk/CMakeFiles/mutomVtk.dir/vtkMuonScatter.cxx.o
[ 63%] Building CXX object src/Vtk/CMakeFiles/mutomVtk.dir/uLibVtkViewer.cpp.o
[ 63%] Generating mutomRootDict.cxx, libmutomRootDict_rdict.pcm, libmutomRootDict.rootmap
[ 63%] Building CXX object src/Vtk/CMakeFiles/mutomVtk.dir/vtkVoxImage.cpp.o
[ 63%] Building CXX object src/Vtk/CMakeFiles/mutomVtk.dir/vtkVoxRaytracerRepresentation.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/muCastorSkinHit.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/muCastorHit.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/muCastorMCTrack.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/muCastorInfo.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/RootMuonScatter.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/muCastorPrimaryVertex.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/muCastorMuDetDIGI.cpp.o
[ 90%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/SkinDetectorWriter.cpp.o
[ 93%] Building CXX object src/Root/CMakeFiles/mutomRoot.dir/mutomRootDict.cxx.o
[ 96%] Linking CXX shared library libmutomVtk.so
[ 96%] Built target mutomVtk
[100%] Linking CXX shared library libmutomRoot.so
[100%] Built target mutomRoot
make: Leaving directory '/home/rigoni/devel/cmt/ulib/build'

7
conanfile.txt Normal file
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@@ -0,0 +1,7 @@
[requires]
eigen/3.4.0
boost/1.83.0
[generators]
CMakeDeps
CMakeToolchain

10
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@@ -0,0 +1,10 @@
name: mutom
channels:
- conda-forge
dependencies:
- compiler-rt
- make
- cmake
- conan
- root
- vtk

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@@ -1,41 +1,27 @@
set(HEADERS
Archives.h
Array.h
Debug.h
Export.h
Function.h
Macros.h
Mpl.h
Object.h
ObjectProps.h
Options.h
Serializable.h
Signal.h
Singleton.h
SmartPointer.h
StaticInterface.h
StringReader.h
Types.h
Uuid.h
Timer.h
)
set(HEADERS Options.h
StaticInterface.h)
set(SOURCES Options.cpp)
set(LIBRARIES ${Boost_PROGRAM_OPTIONS_LIBRARY})
set(libname ${PACKAGE_LIBPREFIX}Core)
set(ULIB_SHARED_LIBRARIES ${ULIB_SHARED_LIBRARIES} ${libname} PARENT_SCOPE)
set(ULIB_SELECTED_MODULES ${ULIB_SELECTED_MODULES} Core PARENT_SCOPE)
add_library(${libname} SHARED ${SOURCES})
set_target_properties(${libname} PROPERTIES
VERSION ${PROJECT_VERSION}
SOVERSION ${PROJECT_SOVERSION})
target_link_libraries(${libname} ${LIBRARIES})
install(TARGETS ${libname}
EXPORT "${PROJECT_NAME}Targets"
RUNTIME DESTINATION ${INSTALL_BIN_DIR} COMPONENT bin
LIBRARY DESTINATION ${INSTALL_LIB_DIR} COMPONENT lib)
install(FILES ${HEADERS} DESTINATION ${INSTALL_INC_DIR}/Core)
SET(SOURCES
Archives.cpp
Object.cpp
Options.cpp
Serializable.cpp
Signal.cpp
Uuid.cpp
)
set(LIBRARIES
${Boost_SERIALIZATION_LIBRARY}
${Boost_SIGNALS_LIBRARY}
${Boost_PROGRAM_OPTIONS_LIBRARY}
${ROOT_LIBRARIES}
)
uLib_add_shared_library(${uLib-module})
add_subdirectory(testing)

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@@ -14,7 +14,6 @@ library_include_HEADERS = \
Macros.h \
Mpl.h \
Object.h \
ObjectProps.h \
Options.h \
Serializable.h \
Signal.h \

View File

@@ -23,178 +23,126 @@
//////////////////////////////////////////////////////////////////////////////*/
#include "config.h"
#include "Object.h"
#include "Vector.h"
#include "boost/archive/polymorphic_xml_oarchive.hpp"
#include "boost/archive/polymorphic_xml_iarchive.hpp"
#include "boost/archive/polymorphic_text_oarchive.hpp"
#include "boost/archive/polymorphic_text_iarchive.hpp"
#include "boost/archive/polymorphic_binary_oarchive.hpp"
#include "boost/archive/polymorphic_binary_iarchive.hpp"
#include "boost/archive/polymorphic_binary_oarchive.hpp"
#include "boost/archive/polymorphic_text_iarchive.hpp"
#include "boost/archive/polymorphic_text_oarchive.hpp"
#include "boost/archive/polymorphic_xml_iarchive.hpp"
#include "boost/archive/polymorphic_xml_oarchive.hpp"
namespace uLib {
const char *Version::PackageName = PACKAGE_NAME;
const char *Version::PackageName = PACKAGE_NAME;
const char *Version::VersionNumber = PACKAGE_VERSION;
const char *Version::Release = "x"; //SVN_REVISION;
const char *Version::Release = "x"; // SVN_REVISION;
////////////////////////////////////////////////////////////////////////////////
// Object Private //
class ObjectPrivate {
public:
struct Signal {
GenericMFPtr sigptr;
std::string sigstr;
SignalBase *signal;
};
struct Signal {
GenericMFPtr sigptr;
std::string sigstr;
SignalBase *signal;
};
struct Slot {
GenericMFPtr sloptr;
std::string slostr;
};
struct Slot {
GenericMFPtr sloptr;
std::string slostr;
};
Vector<Signal> sigv;
Vector<Slot> slov;
Vector<Signal> sigv;
Vector<Slot> slov;
};
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
// OBJECT IMPLEMENTATION
Object::Object() : d(new ObjectPrivate) {}
Object::Object(const Object &copy) : d(new ObjectPrivate(*copy.d)) {}
Object::Object() :
d(new ObjectPrivate)
{}
Object::~Object() { delete d; }
Object::Object(const Object &copy) :
ObjectPropable(copy),
d(new ObjectPrivate(*copy.d))
{}
Object::~Object() {
delete d;
void Object::DeepCopy(const Object &copy) {
// should lock to be tread safe //
memcpy(d, copy.d, sizeof(ObjectPrivate));
// ERROR! does not copy parameters ... <<<< FIXXXXX
}
void Object::DeepCopy(const Object &copy)
{
// should lock to be tread safe //
memcpy(d,copy.d,sizeof(ObjectPrivate));
// ERROR! does not copy parameters ... <<<< FIXXXXX
void Object::SaveXml(std::ostream &os, Object &ob) {
Archive::xml_oarchive ar(os);
ar << boost::serialization::make_nvp("Object", ob);
}
void Object::SaveXml(std::ostream &os, Object &ob)
{
Archive::xml_oarchive ar(os);
ar << boost::serialization::make_nvp("Object",ob);
void Object::LoadXml(std::istream &is, Object &ob) {
Archive::xml_iarchive ar(is);
ar >> boost::serialization::make_nvp("Object", ob);
}
void Object::LoadXml(std::istream &is, Object &ob)
{
Archive::xml_iarchive ar(is);
ar >> boost::serialization::make_nvp("Object",ob);
}
// FINIRE
void Object::SaveConfig(std::ostream &os, int version)
{
Archive::xml_oarchive ar(os);
ObjectPropable::serialize(ar,0);
void Object::SaveConfig(std::ostream &os, int version) {
Archive::xml_oarchive ar(os);
}
void Object::LoadConfig(std::istream &is, int version)
{
if(!props()) this->init_properties();
Archive::xml_iarchive ar(is);
ObjectPropable::serialize(ar,0);
void Object::LoadConfig(std::istream &is, int version) {
Archive::xml_iarchive ar(is);
}
void Object::PrintSelf(std::ostream &o) const
{
o << "OBJECT signals: ------------------\n";
Vector<ObjectPrivate::Signal>::Iterator itr;
for(itr = d->sigv.begin(); itr<d->sigv.end(); itr++)
{
o << " signal:[ " << itr->sigstr << " ]\n";
}
o << "--------------------------------------\n\n";
void Object::PrintSelf(std::ostream &o) const {
o << "OBJECT signals: ------------------\n";
Vector<ObjectPrivate::Signal>::Iterator itr;
for (itr = d->sigv.begin(); itr < d->sigv.end(); itr++) {
o << " signal:[ " << itr->sigstr << " ]\n";
}
o << "--------------------------------------\n\n";
}
bool Object::addSignalImpl(SignalBase *sig, GenericMFPtr fptr, const char *name)
{
ObjectPrivate::Signal s = {fptr,std::string(name),sig};
d->sigv.push_back(s);
bool Object::addSignalImpl(SignalBase *sig, GenericMFPtr fptr,
const char *name) {
ObjectPrivate::Signal s = {fptr, std::string(name), sig};
d->sigv.push_back(s);
}
bool Object::addSlotImpl(GenericMFPtr fptr, const char *name)
{
ObjectPrivate::Slot s = {fptr,std::string(name)};
d->slov.push_back(s);
bool Object::addSlotImpl(GenericMFPtr fptr, const char *name) {
ObjectPrivate::Slot s = {fptr, std::string(name)};
d->slov.push_back(s);
}
SignalBase *Object::findSignalImpl(const GenericMFPtr &fptr) const
{
for(int i=0; i<d->sigv.size(); ++i)
{
if(d->sigv[i].sigptr == fptr)
return d->sigv[i].signal;
}
return NULL;
SignalBase *Object::findSignalImpl(const GenericMFPtr &fptr) const {
for (int i = 0; i < d->sigv.size(); ++i) {
if (d->sigv[i].sigptr == fptr)
return d->sigv[i].signal;
}
return NULL;
}
SignalBase *Object::findSignalImpl(const char *name) const
{
std::string in(name);
for(int i=0; i<d->sigv.size(); ++i)
{
if(d->sigv[i].sigstr == in)
return d->sigv[i].signal;
}
return NULL;
SignalBase *Object::findSignalImpl(const char *name) const {
std::string in(name);
for (int i = 0; i < d->sigv.size(); ++i) {
if (d->sigv[i].sigstr == in)
return d->sigv[i].signal;
}
return NULL;
}
GenericMFPtr *Object::findSlotImpl(const char *name) const
{
std::string in(name);
for(int i=0; i<d->slov.size(); ++i)
{
if(d->slov[i].slostr == in)
return &d->slov[i].sloptr;
}
return NULL;
GenericMFPtr *Object::findSlotImpl(const char *name) const {
std::string in(name);
for (int i = 0; i < d->slov.size(); ++i) {
if (d->slov[i].slostr == in)
return &d->slov[i].sloptr;
}
return NULL;
}
// std::ostream &
// operator << (std::ostream &os, uLib::Object &ob)
// {
@@ -218,10 +166,4 @@ GenericMFPtr *Object::findSlotImpl(const char *name) const
// return is;
// }
} // uLib
} // namespace uLib

View File

@@ -23,200 +23,183 @@
//////////////////////////////////////////////////////////////////////////////*/
#ifndef U_CORE_OBJECT_H
#define U_CORE_OBJECT_H
#include <iostream>
// WARNING: COPILE ERROR if this goes after mpl/vector //
//#include "Core/Vector.h"
// #include "Core/Vector.h"
#include "Core/Types.h"
#include "Core/Debug.h"
#include "Core/Types.h"
#include "Core/Function.h"
#include "Core/Signal.h"
#include "Core/Mpl.h"
#include "Core/Serializable.h"
#include "Core/ObjectProps.h"
#include "Core/Uuid.h"
namespace boost {
namespace archive {
class polymorphic_iarchive;
class polymorphic_oarchive;
} // archive
} // boost
} // namespace archive
} // namespace boost
namespace uLib {
class Version {
public:
static const char *PackageName;
static const char *VersionNumber;
static const char *Release;
static const char *PackageName;
static const char *VersionNumber;
static const char *Release;
};
////////////////////////////////////////////////////////////////////////////////
//// OBJECT ////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
/**
* @brief Object class is the object base implementation for uLib Framework.
*/
class Object : public ObjectPropable
{
class Object {
public:
// std::string name;
// void PrintName() { std::cout << "Ob name: " << name << "\n"; }
// std::string name;
// void PrintName() { std::cout << "Ob name: " << name << "\n"; }
Object();
Object(const Object &copy);
~Object();
Object();
Object(const Object &copy);
~Object();
////////////////////////////////////////////////////////////////////////////
// PARAMETERS //
////////////////////////////////////////////////////////////////////////////
// PARAMETERS //
// FIXX !!!
virtual void DeepCopy(const Object &copy);
// FIXX !!!
virtual void DeepCopy(const Object &copy);
////////////////////////////////////////////////////////////////////////////
// SERIALIZATION //
////////////////////////////////////////////////////////////////////////////
// SERIALIZATION //
template <class ArchiveT>
void serialize(ArchiveT &ar, const unsigned int version) {}
template <class ArchiveT>
void save_override(ArchiveT &ar, const unsigned int version) {}
template <class ArchiveT> void serialize(ArchiveT &ar, const unsigned int version) {
ObjectPropable::serialize(ar,version);
void SaveConfig(std::ostream &os, int version = 0);
void LoadConfig(std::istream &is, int version = 0);
static void SaveXml(std::ostream &os, Object &ob);
static void LoadXml(std::istream &is, Object &ob);
////////////////////////////////////////////////////////////////////////////
// SIGNALS //
// Qt4 style connector //
static bool connect(const Object *ob1, const char *signal_name,
const Object *receiver, const char *slot_name) {
// // NOT WORKING YET //
// 1) find slot pointer from name
// SignalBase *sig = ob1->findSignal(signal_name);
// GenericMFPtr *slo = receiver->findSlot(slot_name);
// if(sig && slo)
// return Object::connect(sig,slo->operator ()(),receiver);
// else return false;
}
// Qt5 style connector //
template <typename Func1, typename Func2>
static bool
connect(typename FunctionPointer<Func1>::Object *sender, Func1 sigf,
typename FunctionPointer<Func2>::Object *receiver, Func2 slof) {
SignalBase *sigb = sender->findOrAddSignal(sigf);
typedef boost::signals2::signal<
typename FunctionPointer<Func2>::SignalSignature>
SigT;
ConnectSignal(sigb, slof, receiver);
}
template <typename FuncT>
static inline bool connect(SignalBase *sigb, FuncT slof, Object *receiver) {
ConnectSignal(sigb, slof, receiver);
}
template <typename FuncT>
inline
typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type *
addSignal(FuncT fun, const char *name) {
typedef
typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type
SigT;
SignalBase *sig = NewSignal(fun);
addSignalImpl(sig, fun, name);
return (SigT *)sig;
}
template <typename FuncT> inline bool addSlot(FuncT fun, const char *name) {
this->addSlotImpl(GenericMFPtr(fun), name);
}
template <typename FuncT>
inline
typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type *
findSignal(FuncT fptr) {
typedef
typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type
SigT;
return (SigT *)findSignalImpl(GenericMFPtr(fptr));
}
template <typename FuncT>
inline
typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type *
findOrAddSignal(FuncT fptr) {
typedef
typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type
SigT;
SignalBase *sig = findSignalImpl(GenericMFPtr(fptr));
if (!sig) {
sig = NewSignal(fptr);
addSignalImpl(sig, fptr, "signal_name_to_be_implemented");
}
template <class ArchiveT> void save_override(ArchiveT &ar,const unsigned int version) {}
return (SigT *)sig;
}
void SaveConfig(std::ostream &os, int version = 0);
void LoadConfig(std::istream &is, int version = 0);
inline SignalBase *findSignal(const char *name) const {
return findSignalImpl(name);
}
static void SaveXml(std::ostream &os, Object &ob);
static void LoadXml(std::istream &is, Object &ob);
inline GenericMFPtr *findSlot(const char *name) const {
return findSlotImpl(name);
}
void PrintSelf(std::ostream &o) const;
////////////////////////////////////////////////////////////////////////////
// SIGNALS //
// Qt4 style connector //
static bool connect(const Object *ob1, const char *signal_name, const Object *receiver, const char *slot_name) {
// // NOT WORKING YET //
// 1) find slot pointer from name
// SignalBase *sig = ob1->findSignal(signal_name);
// GenericMFPtr *slo = receiver->findSlot(slot_name);
// if(sig && slo)
// return Object::connect(sig,slo->operator ()(),receiver);
// else return false;
}
// Qt5 style connector //
template <typename Func1, typename Func2>
static bool connect( typename FunctionPointer<Func1>::Object *sender, Func1 sigf,
typename FunctionPointer<Func2>::Object *receiver, Func2 slof)
{
SignalBase *sigb = sender->findOrAddSignal(sigf);
typedef boost::signals2::signal<typename FunctionPointer<Func2>::SignalSignature> SigT;
ConnectSignal(sigb,slof,receiver);
}
template <typename FuncT>
static inline bool connect(SignalBase *sigb, FuncT slof, Object *receiver) {
ConnectSignal(sigb,slof,receiver);
}
template< typename FuncT >
inline typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type *
addSignal(FuncT fun, const char *name) {
typedef typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type SigT;
SignalBase *sig = NewSignal(fun);
addSignalImpl(sig,fun,name);
return (SigT *)sig;
}
template< typename FuncT>
inline bool addSlot(FuncT fun, const char *name) {
this->addSlotImpl(GenericMFPtr(fun),name);
}
template < typename FuncT >
inline typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type *
findSignal(FuncT fptr)
{
typedef typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type SigT;
return (SigT *)findSignalImpl(GenericMFPtr(fptr));
}
template < typename FuncT >
inline typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type *
findOrAddSignal(FuncT fptr)
{
typedef typename Signal<typename FunctionPointer<FuncT>::SignalSignature>::type SigT;
SignalBase *sig = findSignalImpl(GenericMFPtr(fptr));
if(!sig) {
sig = NewSignal(fptr);
addSignalImpl(sig,fptr,"signal_name_to_be_implemented");
}
return (SigT *)sig;
}
inline SignalBase *
findSignal(const char *name) const
{
return findSignalImpl(name);
}
inline GenericMFPtr *
findSlot(const char *name) const
{
return findSlotImpl(name);
}
void PrintSelf(std::ostream &o) const;
inline const Object& operator = (const Object &copy)
{ this->DeepCopy(copy); return *this; }
inline const Object &operator=(const Object &copy) {
this->DeepCopy(copy);
return *this;
}
private:
bool addSignalImpl(SignalBase *sig, GenericMFPtr fptr, const char *name);
bool addSlotImpl(GenericMFPtr fptr, const char *name);
SignalBase *findSignalImpl(const GenericMFPtr &fptr) const;
SignalBase *findSignalImpl(const char *name) const;
GenericMFPtr *findSlotImpl(const char *name) const;
bool addSignalImpl(SignalBase *sig, GenericMFPtr fptr, const char *name);
bool addSlotImpl(GenericMFPtr fptr, const char *name);
SignalBase *findSignalImpl(const GenericMFPtr &fptr) const;
SignalBase *findSignalImpl(const char *name) const;
GenericMFPtr *findSlotImpl(const char *name) const;
friend class boost::serialization::access;
friend class ObjectPrivate;
class ObjectPrivate *d;
friend class boost::serialization::access;
friend class ObjectPrivate;
class ObjectPrivate *d;
};
} // uLib
} // namespace uLib
////////////////////////////////////////////////////////////////////////////////
//std::ostream & operator << (std::ostream &os, uLib::Object &ob);
//std::ostream & operator << (std::ostream &os, uLib::Object *ob);
//std::istream & operator >> (std::istream &is, uLib::Object &ob);
// std::ostream & operator << (std::ostream &os, uLib::Object &ob);
// std::ostream & operator << (std::ostream &os, uLib::Object *ob);
// std::istream & operator >> (std::istream &is, uLib::Object &ob);
#endif // U_OBJECT_H

View File

@@ -1,278 +0,0 @@
/*//////////////////////////////////////////////////////////////////////////////
// CMT Cosmic Muon Tomography project //////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
Copyright (c) 2014, Universita' degli Studi di Padova, INFN sez. di Padova
All rights reserved
Authors: Andrea Rigoni Garola < andrea.rigoni@pd.infn.it >
------------------------------------------------------------------
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 3.0 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library.
//////////////////////////////////////////////////////////////////////////////*/
#ifndef U_OBJECTPROPS_H
#define U_OBJECTPROPS_H
#include <boost/algorithm/string/replace.hpp>
#include <Core/Mpl.h>
#include <Core/Types.h>
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
// MACROS //
#define ULIB_props() \
public: struct ObjectProps; \
virtual void init_properties(); \
inline struct ObjectProps &p() { /* static const unsigned int offset = props_offset(this); */ \
/* NON FUNZIA! return * (struct ObjectProps *)(reinterpret_cast<char*>(props())+offset); */ \
return *props()->ptr<ObjectProps>(); } \
typedef uLib::mpl::bool_<true>::type propable_trait; \
public: struct DLL_PUBLIC ObjectProps
#define properties() ULIB_props()
#define default(vlaue)
#define $$ p()
#define $(_name) props_ref<_name>()
#define $_init() \
if(props(this)) return; \
props_new(this); \
uLib::detail::ObjectProps::initializer::init_object_baselist(this);
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
namespace boost {
namespace serialization {
class access;
}
}
namespace uLib {
namespace detail {
struct ObjectProps {
/** Define a trait has_member to find if an Object is Propable*/
BOOST_MPL_HAS_XXX_TRAIT_DEF(propable_trait)
/** IsA ProbapleObject Implementation Template */
template <class T>
struct IsA : has_propable_trait<T> {};
/** Lambda to get Props member type */
template <class T>
struct props_type {
typedef typename T::ObjectProps type;
};
template <typename T>
struct get_props {
/** CFList has result but this method check for has BaseList */
typedef typename detail::TypeIntrospection::child_first<T>::type CFTypeList;
/** Filter List items that have not Propable feature */
typedef typename mpl::filter_view< CFTypeList, IsA<mpl::_> >::type FilteredCFTypeList;
/** Get Props from each Parent in Seq */
typedef typename mpl::transform_view< FilteredCFTypeList, props_type<mpl::_> >::type type;
// qui sotto ho un problema che ho temporaneamente tamponato //
// ovvero ho usato child_first_impl per ottenere la lista delle basi //
// vorrei farlo facendo un pop_back ma non va forse perche il tipo //
// non e' corretto. //
/** Get Parent list from CFTypeList */
typedef typename detail::TypeIntrospection::child_first_impl<T>::Childs CFBaseList;
/** Filter Parents that have not Propable feature */
typedef typename mpl::filter_view< CFBaseList, IsA<mpl::_> >::type FilteredCFBaseList;
};
// TODO: convert to pp const value,
// (non so se sia possibile con il dinamic casting intanto funziona cosi' )
template <typename T1, typename T2>
static unsigned int measure_offset(T1 base, T2 derived) {
return reinterpret_cast<char*>(derived) - reinterpret_cast<char*>(base);
}
struct initializer {
template <class _ObjectT>
struct lambda_init_object {
_ObjectT *o;
lambda_init_object(_ObjectT *o) : o(o) {}
template<class T> void operator()(T) {
o->T::init_properties();
}
};
/**
* This calls the internal init_properties() virtual function for each
* object parent defined in BaseList only if it is propable
*/
template <class T>
static void init_object_baselist(T *o) {
typedef typename uLib::detail::ObjectProps::get_props<T>::FilteredCFBaseList CFBaseList;
mpl::for_each<CFBaseList>(lambda_init_object<T>(o));
}
/**
* This calls the internal init_properties() virtual function only if
* object is propable ( implementation if not propable )
*/
template <class T>
static
typename boost::enable_if<mpl::not_<IsA<T> >,void>::type
init_object(T *o) {
; // do nothing //
}
/**
* This calls the internal init_properties() virtual function only if
* object is propable ( implementation if propable )
*/
template <class T>
static
typename boost::enable_if<IsA<T>,void>::type
init_object(T *o) {
o->init_properties();
}
};
template <class ThisClass, class Archive>
struct serialize_baselist {
ThisClass & m_object;
Archive & m_ar;
serialize_baselist(ThisClass &o, Archive &ar) : m_object(o), m_ar(ar) {}
template <class T> void operator()(T &o) {
// T is taken fron get_props<BaseList>::FilteredPList types to get
// type_info_name that is the type name defined by Type macro
typedef typename props_type<T>::type PType;
std::string name(TypeIntrospection::access<T>::type_info::name);
boost::algorithm::replace_all(name,"::","_");
m_ar & boost::serialization::make_nvp(
name.c_str() ,
boost::serialization::base_object<PType>(m_object));
}
};
};
} // detail
struct ObjectPropsBase {
virtual ~ObjectPropsBase() {}
virtual ObjectPropsBase *copy() = 0;
template <class T> inline T *ptr() { return dynamic_cast<T*>(this); }
template<class ArchiveT> void serialize(ArchiveT &ar, const unsigned int version) {}
};
template <class T>
struct ObjectPropsImpl :
ObjectPropsBase,
ULIB_MPL_INHERIT_NOFOLD_SEQ(typename uLib::detail::ObjectProps::get_props<T>::type)
{
typedef ObjectPropsImpl<T> ThisClass;
typedef typename uLib::detail::ObjectProps::get_props<T>::type CFList;
typedef typename uLib::detail::ObjectProps::get_props<T>::FilteredCFTypeList FilteredCFTypeList;
ObjectPropsBase *copy() { return new ThisClass(*this); }
template<class ArchiveT> void serialize(ArchiveT &ar, const unsigned int version) {
boost::serialization::void_cast_register<ThisClass,ObjectPropsBase>();
mpl::for_each<FilteredCFTypeList>(detail::ObjectProps::serialize_baselist<ThisClass,ArchiveT>(*this,ar));
}
};
class ObjectPropable {
ObjectPropsBase *m_props;
friend class uLib::detail::ObjectProps;
friend class boost::serialization::access;
public:
ObjectPropable() : m_props(NULL) {}
ObjectPropable(const ObjectPropable &c) { if(c.m_props) m_props = c.m_props->copy(); else m_props = NULL; }
~ObjectPropable() { if(m_props) delete m_props; }
template <class T> inline typename T::ObjectProps& props_ref() const { if(m_props) return *m_props->ptr<typename T::ObjectProps>(); else exit(1); }
template <class T> inline typename T::ObjectProps* props(T *ptr = NULL) const { if(m_props) return m_props->ptr<typename T::ObjectProps>(); else return NULL; }
protected:
ObjectPropsBase *props() const { return m_props; }
template <class T> inline void props_new(T* ptr = NULL) { if(!m_props) m_props = new ObjectPropsImpl<T>; }
/** NOT working dynamic cache casting */
template <class T> inline unsigned int props_offset(T *ptr) const
{ if(m_props) return detail::ObjectProps::measure_offset(m_props,m_props->ptr<T>()); else return -1; }
template<class ArchiveT> void serialize(ArchiveT &ar, const unsigned int version) {
if(m_props) ar & boost::serialization::make_nvp("properties",m_props);
}
public:
/**
* ObjectPropable is not directly propable itself to prevent Basclass
* duplication in inherit_nofold. And for the same reason ANY VIRTUAL BASE
* SHOULD NOT BE PROPABLE
*/
virtual void init_properties() {}
};
} // uLib
#endif // U_OBJECTPROPS_H

View File

@@ -31,6 +31,9 @@
#include <boost/program_options.hpp>
#include <boost/property_tree/ptree.hpp>
#include <boost/property_tree/ini_parser.hpp>
//class boost::program_options::error_with_option_name;
//template<> boost::program_options::typed_value<int> boost::program_options::value<int>();
@@ -74,6 +77,23 @@ void Options::parse_config_file(const char *fname)
}
}
void Options::save_config_file(const char *fname) {
std::ofstream os;
os.open(fname);
using boost::property_tree::ptree;
ptree root;
std::cout << m_configuration << "\n";
std::cout << m_global << "\n";
write_ini( std::cout, root );
}
bool Options::count(const char *str) const
{
return (m_vm.count(str));

View File

@@ -160,6 +160,8 @@ public:
void parse_config_file(const char *fname);
void save_config_file(const char *fname);
template <typename T>
static inline boost::program_options::typed_value<T>* value(T *v, T dvalue) {
boost::program_options::typed_value<T> *r = boost::program_options::value<T>(v);

View File

@@ -23,8 +23,6 @@
//////////////////////////////////////////////////////////////////////////////*/
#ifndef U_SERIALIZABLE_H
#define U_SERIALIZABLE_H
@@ -38,9 +36,6 @@ TODO:
*/
#include <boost/serialization/access.hpp>
#include <boost/serialization/export.hpp>
@@ -48,26 +43,22 @@ TODO:
#include <boost/mpl/remove_if.hpp>
#include <boost/serialization/nvp.hpp>
//#include <boost/archive/xml_iarchive.hpp>
//#include <boost/archive/xml_oarchive.hpp>
//#include <boost/archive/text_iarchive.hpp>
//#include <boost/archive/text_oarchive.hpp>
//#include "boost/archive/polymorphic_iarchive.hpp"
//#include "boost/archive/polymorphic_oarchive.hpp"
// #include <boost/archive/xml_iarchive.hpp>
// #include <boost/archive/xml_oarchive.hpp>
// #include <boost/archive/text_iarchive.hpp>
// #include <boost/archive/text_oarchive.hpp>
// #include "boost/archive/polymorphic_iarchive.hpp"
// #include "boost/archive/polymorphic_oarchive.hpp"
#include <boost/preprocessor/comma_if.hpp>
#include <boost/preprocessor/repeat.hpp>
#include <boost/preprocessor/inc.hpp>
#include <boost/preprocessor/cat.hpp>
#include <boost/preprocessor/comma_if.hpp>
#include <boost/preprocessor/inc.hpp>
#include <boost/preprocessor/repeat.hpp>
#include <boost/preprocessor/tuple/to_seq.hpp>
#include "Core/Mpl.h"
#include "Core/ObjectProps.h"
#include "Core/Archives.h"
#include "Core/Export.h"
#include "Core/Mpl.h"
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
@@ -80,63 +71,47 @@ namespace serialization {
// ACCESS 2 //
template <class T> struct access2 {};
// NON FUNZIONA ... SISTEMARE !!!! // ------------------------------------------
template<class T>
class hrp :
public wrapper_traits<const hrp< T > >
{
const char *m_name;
T *m_value;
std::string *m_str;
template <class T> class hrp : public wrapper_traits<const hrp<T>> {
const char *m_name;
T *m_value;
std::string *m_str;
public:
explicit hrp(const char * name_, T &t) :
m_str(new std::string),
m_name(name_), m_value(&t) {}
explicit hrp(const char *name_, T &t)
: m_str(new std::string), m_name(name_), m_value(&t) {}
const char * name() const {
return this->m_name;
}
const char *name() const { return this->m_name; }
template<class Archivex>
void save( Archivex & ar, const unsigned int /* file_version */) const {
//// ar.operator<<(const_value());
// std::stringstream ss;
// uLib::Archive::hrt_oarchive har(ss);
// har << make_nvp(m_name,*m_value);
// // (*m_str) = ss.str();
//// ar.operator << (make_nvp(m_name, ss.str());
}
template<class Archivex>
void load( Archivex & ar, const unsigned int /* file_version */) {
// ar.operator>>(value());
}
BOOST_SERIALIZATION_SPLIT_MEMBER()
template <class Archivex>
void save(Archivex &ar, const unsigned int /* file_version */) const {
//// ar.operator<<(const_value());
// std::stringstream ss;
// uLib::Archive::hrt_oarchive har(ss);
// har << make_nvp(m_name,*m_value);
// // (*m_str) = ss.str();
//// ar.operator << (make_nvp(m_name, ss.str());
}
template <class Archivex>
void load(Archivex &ar, const unsigned int /* file_version */) {
// ar.operator>>(value());
}
BOOST_SERIALIZATION_SPLIT_MEMBER()
};
template<class T>
template <class T>
inline
#ifndef BOOST_NO_FUNCTION_TEMPLATE_ORDERING
const
const
#endif
hrp< T > make_hrp(const char * name, T & t){
return hrp< T >(name, t);
hrp<T> make_hrp(const char *name, T &t) {
return hrp<T>(name, t);
}
#define HRP(name) \
boost::serialization::make_hrp(BOOST_PP_STRINGIZE(name), name)
} // serialization
} // boost
#define HRP(name) boost::serialization::make_hrp(BOOST_PP_STRINGIZE(name), name)
} // namespace serialization
} // namespace boost
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
@@ -151,9 +126,7 @@ hrp< T > make_hrp(const char * name, T & t){
namespace uLib {
#define _AR_OP(r,data,elem) data&BOOST_SERIALIZATION_BASE_OBJECT_NVP(elem);
#define _AR_OP(r, data, elem) data &BOOST_SERIALIZATION_BASE_OBJECT_NVP(elem);
#define NVP(data) BOOST_SERIALIZATION_NVP(data)
@@ -166,51 +139,53 @@ namespace uLib {
// SO LEAVE ULIB_CFG_INTRUSIVE_SERIALIZATION NOT DEFINED
#ifdef ULIB_CFG_INTRUSIVE_SERIALIZATION_OBJECT
# define ULIB_SERIALIZABLE_OBJECT _ULIB_DETAIL_INTRUSIVE_SERIALIZABLE_OBJECT
# define ULIB_SERIALIZE_OBJECT(_Ob,...) _ULIB_DETAIL_INTRUSIVE_SERIALIZE_OBJECT(_Ob,__VA_ARGS__)
# define _AR_(_name) _ULIB_DETAIL_INTRUSIVE_AR_(_name)
#define ULIB_SERIALIZABLE_OBJECT _ULIB_DETAIL_INTRUSIVE_SERIALIZABLE_OBJECT
#define ULIB_SERIALIZE_OBJECT(_Ob, ...) \
_ULIB_DETAIL_INTRUSIVE_SERIALIZE_OBJECT(_Ob, __VA_ARGS__)
#define _AR_(_name) _ULIB_DETAIL_INTRUSIVE_AR_(_name)
#else
# define ULIB_SERIALIZABLE(_Ob) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE(_Ob) \
ULIB_CLASS_EXPORT_KEY(_Ob)
# define ULIB_SERIALIZE(_Ob,...) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE(_Ob)
# define ULIB_SERIALIZE_DERIVED(_Ob,...) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_DERIVED(_Ob,__VA_ARGS__)
# define ULIB_SERIALIZABLE_OBJECT(_Ob) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE_OBJECT(_Ob) \
ULIB_CLASS_EXPORT_OBJECT_KEY(_Ob)
# define ULIB_SERIALIZE_OBJECT(_Ob,...) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_OBJECT(_Ob,__VA_ARGS__)
# define ULIB_SERIALIZE_OBJECT_PROPS(_Ob) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_PROPS(_Ob)
# define AR(_name) _ULIB_DETAIL_UNINTRUSIVE_AR_(_name)
# define HR(_name) _ULIB_DETAIL_UNINTRUSIVE_AR_(_name)
#define ULIB_SERIALIZABLE(_Ob) \
_ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE(_Ob) \
ULIB_CLASS_EXPORT_KEY(_Ob)
#define ULIB_SERIALIZE(_Ob, ...) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE(_Ob)
#define ULIB_SERIALIZE_DERIVED(_Ob, ...) \
_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_DERIVED(_Ob, __VA_ARGS__)
#define ULIB_SERIALIZABLE_OBJECT(_Ob) \
_ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE_OBJECT(_Ob) \
ULIB_CLASS_EXPORT_OBJECT_KEY(_Ob)
#define ULIB_SERIALIZE_OBJECT(_Ob, ...) \
_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_OBJECT(_Ob, __VA_ARGS__)
#define AR(_name) _ULIB_DETAIL_UNINTRUSIVE_AR_(_name)
#define HR(_name) _ULIB_DETAIL_UNINTRUSIVE_AR_(_name)
#endif
#define ULIB_SERIALIZE_ACCESS \
friend class boost::serialization::access; \
template <class T> friend class boost::serialization::access2;
#define ULIB_SERIALIZE_ACCESS \
friend class boost::serialization::access; \
template <class T> friend class boost::serialization::access2;
#define ULIB_CLASS_EXPORT_KEY(_FullNamespaceClass) \
BOOST_CLASS_EXPORT_KEY(_FullNamespaceClass)
#define ULIB_CLASS_EXPORT_KEY(_FullNamespaceClass) \
BOOST_CLASS_EXPORT_KEY(_FullNamespaceClass)
#define ULIB_CLASS_EXPORT_OBJECT_KEY(_FullNamespaceClass) \
BOOST_CLASS_EXPORT_KEY(_FullNamespaceClass) \
BOOST_CLASS_EXPORT_KEY(_FullNamespaceClass::ObjectProps) \
BOOST_CLASS_EXPORT_KEY(uLib::ObjectPropsImpl<_FullNamespaceClass>)
#define _SERIALIZE_IMPL_SEQ \
(uLib::Archive::text_iarchive) \
(uLib::Archive::text_oarchive) \
(uLib::Archive::hrt_iarchive) \
(uLib::Archive::hrt_oarchive) \
(uLib::Archive::xml_iarchive) \
(uLib::Archive::xml_oarchive) \
(uLib::Archive::log_archive)
#define ULIB_CLASS_EXPORT_OBJECT_KEY(_FullNamespaceClass) \
BOOST_CLASS_EXPORT_KEY(_FullNamespaceClass)
#define _SERIALIZE_IMPL_SEQ \
(uLib::Archive::text_iarchive)(uLib::Archive::text_oarchive)( \
uLib::Archive:: \
hrt_iarchive)(uLib::Archive:: \
hrt_oarchive)(uLib::Archive:: \
xml_iarchive)(uLib::Archive:: \
xml_oarchive)(uLib::Archive:: \
log_archive)
/** Solving virtual class check problem */
#define _ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE(_Base,_Derived) namespace boost{ template<> struct is_virtual_base_of<_Base,_Derived>: public boost::mpl::true_ {}; }
#define _ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP(r,data,elem) _ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE(elem,data)
#define _ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE(_Base, _Derived) \
namespace boost { \
template <> \
struct is_virtual_base_of<_Base, _Derived> : public boost::mpl::true_ {}; \
}
#define _ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP(r, data, elem) \
_ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE(elem, data)
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
@@ -220,38 +195,57 @@ namespace uLib {
////////////////////////////////////////////////////////////////////////////////
// INTRUSIVE SERIALIZATION ( NOT WORKING YET !! ) //
#define _ULIB_DETAIL_INTRUSIVE_AR_(name) ar & BOOST_SERIALIZATION_NVP(name);
#define _ULIB_DETAIL_INTRUSIVE_AR_(name) ar &BOOST_SERIALIZATION_NVP(name);
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC(Class,Archive) \
template void Class::serialize(Archive &ar,const unsigned int);
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC(Class, Archive) \
template void Class::serialize(Archive &ar, const unsigned int);
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC_OP(r,data,elem) _ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC(data,elem);
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZABLE_OBJECT \
typedef boost::mpl::bool_<true> serializable; \
typedef boost::mpl::remove_if< TypeList, IsUnSerializable >::type SerilizableTypeList; \
void PrintSerializableListId() { boost::mpl::for_each<SerilizableTypeList>(PrintTypeId()); } \
template <class ArchiveT> void serialize(ArchiveT &ar,const unsigned int version); \
template <class ArchiveT> void serialize_parents(ArchiveT &ar,const unsigned int version); \
template <class ArchiveT> void save_override(ArchiveT &ar,const unsigned int version);
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZE_OBJECT(_Ob,...) \
template <class ArchiveT> void _Ob::serialize(ArchiveT &ar, const unsigned int version) { \
boost::serialization::void_cast_register<_Ob,_Ob::BaseClass>(static_cast<_Ob *>(NULL),static_cast<_Ob::BaseClass *>(NULL)); \
_Ob::serialize_parents(ar,version); \
_Ob::save_override(ar,version); }\
template <class ArchiveT> void _Ob::serialize_parents(ArchiveT &ar, const unsigned int v) { \
BOOST_PP_SEQ_FOR_EACH(_AR_OP,ar,BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))); } \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC_OP,_Ob,_SERIALIZE_IMPL_SEQ)\
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP,_Ob,BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))) \
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
namespace boost { \
namespace serialization { \
template<class ArchiveT> inline void load_construct_data(ArchiveT & ar, _Ob *o, const unsigned int file_version) \
{ ::new(o)_Ob(); o->init_parameters(); } }}\
template <class ArchiveT> void _Ob::save_override(ArchiveT &ar, const unsigned int version)
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC_OP(r, data, elem) \
_ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC(data, elem);
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZABLE_OBJECT \
typedef boost::mpl::bool_<true> serializable; \
typedef boost::mpl::remove_if<TypeList, IsUnSerializable>::type \
SerilizableTypeList; \
void PrintSerializableListId() { \
boost::mpl::for_each<SerilizableTypeList>(PrintTypeId()); \
} \
template <class ArchiveT> \
void serialize(ArchiveT &ar, const unsigned int version); \
template <class ArchiveT> \
void serialize_parents(ArchiveT &ar, const unsigned int version); \
template <class ArchiveT> \
void save_override(ArchiveT &ar, const unsigned int version);
#define _ULIB_DETAIL_INTRUSIVE_SERIALIZE_OBJECT(_Ob, ...) \
template <class ArchiveT> \
void _Ob::serialize(ArchiveT &ar, const unsigned int version) { \
boost::serialization::void_cast_register<_Ob, _Ob::BaseClass>( \
static_cast<_Ob *>(NULL), static_cast<_Ob::BaseClass *>(NULL)); \
_Ob::serialize_parents(ar, version); \
_Ob::save_override(ar, version); \
} \
template <class ArchiveT> \
void _Ob::serialize_parents(ArchiveT &ar, const unsigned int v) { \
BOOST_PP_SEQ_FOR_EACH(_AR_OP, ar, BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))); \
} \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_INTRUSIVE_SERIALIZE_FUNC_OP, _Ob, \
_SERIALIZE_IMPL_SEQ) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP, _Ob, \
BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))) \
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
namespace boost { \
namespace serialization { \
template <class ArchiveT> \
inline void load_construct_data(ArchiveT &ar, _Ob *o, \
const unsigned int file_version) { \
::new (o) _Ob(); \
o->init_parameters(); \
} \
} \
} \
template <class ArchiveT> \
void _Ob::save_override(ArchiveT &ar, const unsigned int version)
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
@@ -261,152 +255,171 @@ namespace uLib {
////////////////////////////////////////////////////////////////////////////////
// UNINTRUSIVE SERIALIZATION
#define _UNAR_OP(r,data,elem) ar&boost::serialization::make_nvp(BOOST_PP_STRINGIZE(elem),boost::serialization::base_object<elem>(ob));
#define _UNAR_OP(r, data, elem) \
ar &boost::serialization::make_nvp( \
BOOST_PP_STRINGIZE(elem), boost::serialization::base_object<elem>(ob));
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC(Class,Archive) \
template void boost::serialization::serialize(Archive &ar, Class &ob, const unsigned int i);
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP(r,data,elem) _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC(data,elem)
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC(Class, Archive) \
template void boost::serialization::serialize(Archive &ar, Class &ob, \
const unsigned int i);
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP(r, data, elem) \
_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC(data, elem)
// NOTE: becouse of BOOST_PP_VARIADIC_SIZE issue of some boost macro has two
// different implementation
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE(_Ob) \
namespace boost { namespace serialization { \
template <class ArchiveT> void serialize (ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <class ArchiveT> void serialize_parents (ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <> struct access2< _Ob > { template <class ArchiveT> static void save_override (ArchiveT &ar, _Ob &ob, const unsigned int version); }; }}
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE(_Ob) \
namespace boost { namespace serialization { \
template <class ArchiveT> void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int v) {} \
template <class ArchiveT> void serialize (ArchiveT &ar, _Ob &ob, const unsigned int version) { \
serialize_parents(ar,ob,version); \
access2< _Ob >::save_override(ar,ob,version); } }}\
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP,_Ob,_SERIALIZE_IMPL_SEQ)\
template <class ArchiveT> void boost::serialization::access2< _Ob >::save_override(ArchiveT &ar, _Ob &ob, const unsigned int version)
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_DERIVED(_Ob,...) \
namespace boost { namespace serialization { \
template <class ArchiveT> void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int v) { \
BOOST_PP_IF(BOOST_PP_VARIADIC_SIZE((__VA_ARGS__)),BOOST_PP_SEQ_FOR_EACH(_UNAR_OP,ob,BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__)));,) } \
template <class ArchiveT> void serialize (ArchiveT &ar, _Ob &ob, const unsigned int version) { \
serialize_parents(ar,ob,version); \
access2< _Ob >::save_override (ar,ob,version); } }}\
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP,_Ob,_SERIALIZE_IMPL_SEQ) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP,_Ob,BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))) \
template <class ArchiveT> void boost::serialization::access2< _Ob >::save_override(ArchiveT &ar, _Ob &ob, const unsigned int version)
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE_OBJECT(_Ob) \
namespace boost { namespace serialization { \
template <class ArchiveT> void serialize (ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <class ArchiveT> void serialize_parents (ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <> struct access2< _Ob > { template <class ArchiveT> static void save_override (ArchiveT &ar, _Ob &ob, const unsigned int version); }; \
template <class ArchiveT> void serialize (ArchiveT &ar, class _Ob::ObjectProps &ob, const unsigned int version); \
template <class ArchiveT> void save_override (ArchiveT &ar, class _Ob::ObjectProps &ob, const unsigned int version); }}
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_OBJECT(_Ob,...) \
namespace boost { namespace serialization { \
template <class ArchiveT> void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int v) { \
/* PP serialize */ BOOST_PP_SEQ_FOR_EACH(_UNAR_OP,ob,BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))); \
/* MPL serialize */ /*uLib::mpl::for_each<_Ob::BaseList>(uLib::detail::Serializable::serialize_baseobject<_Ob,ArchiveT>(ob,ar) );*/ } \
template<class ArchiveT> inline void load_construct_data(ArchiveT & ar, _Ob *ob, const unsigned int file_version) { \
::new(ob)_Ob(); uLib::detail::ObjectProps::initializer::init_object(ob); } \
template <class ArchiveT> void serialize (ArchiveT &ar, _Ob &ob, const unsigned int version) { \
void_cast_register<_Ob,_Ob::BaseClass>(static_cast<_Ob *>(NULL),static_cast<_Ob::BaseClass *>(NULL)); /*fix*/ \
serialize_parents(ar,ob,version); \
access2< _Ob >::save_override (ar,ob,version); } }}\
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP,_Ob,BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP,_Ob,_SERIALIZE_IMPL_SEQ)\
template <class ArchiveT> void boost::serialization::access2< _Ob >::save_override(ArchiveT &ar, _Ob &ob, const unsigned int version)
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_PROPS(_Ob) \
namespace boost { namespace serialization { \
template <class ArchiveT> void serialize (ArchiveT &ar, _Ob::ObjectProps &ob, const unsigned int version) { \
save_override (ar,ob,version); } }}\
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP,_Ob::ObjectProps,_SERIALIZE_IMPL_SEQ)\
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob::ObjectProps) \
ULIB_CLASS_EXPORT_IMPLEMENT(uLib::ObjectPropsImpl<_Ob>) \
template <class ArchiveT> void boost::serialization::save_override(ArchiveT &ar, _Ob::ObjectProps &ob, const unsigned int version)
#define _ULIB_DETAIL_UNINTRUSIVE_AR_(name) boost::serialization::make_nvp(BOOST_PP_STRINGIZE(name),ob.name)
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE(_Ob) \
namespace boost { \
namespace serialization { \
template <class ArchiveT> \
void serialize(ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <class ArchiveT> \
void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <> struct access2<_Ob> { \
template <class ArchiveT> \
static void save_override(ArchiveT &ar, _Ob &ob, \
const unsigned int version); \
}; \
} \
}
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE(_Ob) \
namespace boost { \
namespace serialization { \
template <class ArchiveT> \
void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int v) {} \
template <class ArchiveT> \
void serialize(ArchiveT &ar, _Ob &ob, const unsigned int version) { \
serialize_parents(ar, ob, version); \
access2<_Ob>::save_override(ar, ob, version); \
} \
} \
} \
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP, _Ob, \
_SERIALIZE_IMPL_SEQ) \
template <class ArchiveT> \
void boost::serialization::access2<_Ob>::save_override( \
ArchiveT &ar, _Ob &ob, const unsigned int version)
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_DERIVED(_Ob, ...) \
namespace boost { \
namespace serialization { \
template <class ArchiveT> \
void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int v) { \
BOOST_PP_IF(BOOST_PP_VARIADIC_SIZE((__VA_ARGS__)), \
BOOST_PP_SEQ_FOR_EACH(_UNAR_OP, ob, \
BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))); \
, ) \
} \
template <class ArchiveT> \
void serialize(ArchiveT &ar, _Ob &ob, const unsigned int version) { \
serialize_parents(ar, ob, version); \
access2<_Ob>::save_override(ar, ob, version); \
} \
} \
} \
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP, _Ob, \
_SERIALIZE_IMPL_SEQ) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP, _Ob, \
BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))) \
template <class ArchiveT> \
void boost::serialization::access2<_Ob>::save_override( \
ArchiveT &ar, _Ob &ob, const unsigned int version)
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZABLE_OBJECT(_Ob) \
namespace boost { \
namespace serialization { \
template <class ArchiveT> \
void serialize(ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <class ArchiveT> \
void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int version); \
template <> struct access2<_Ob> { \
template <class ArchiveT> \
static void save_override(ArchiveT &ar, _Ob &ob, \
const unsigned int version); \
}; \
} \
}
#define _ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_OBJECT(_Ob, ...) \
namespace boost { \
namespace serialization { \
template <class ArchiveT> \
void serialize_parents(ArchiveT &ar, _Ob &ob, const unsigned int v) { \
/* PP serialize */ BOOST_PP_SEQ_FOR_EACH( \
_UNAR_OP, ob, BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))); \
/* MPL serialize */ /*uLib::mpl::for_each<_Ob::BaseList>(uLib::detail::Serializable::serialize_baseobject<_Ob,ArchiveT>(ob,ar) );*/ } \
template <class ArchiveT> \
inline void load_construct_data(ArchiveT &ar, _Ob *ob, \
const unsigned int file_version) { \
::new (ob) _Ob(); \
} \
template <class ArchiveT> \
void serialize(ArchiveT &ar, _Ob &ob, const unsigned int version) { \
void_cast_register<_Ob, _Ob::BaseClass>( \
static_cast<_Ob *>(NULL), \
static_cast<_Ob::BaseClass *>(NULL)); /*fix*/ \
serialize_parents(ar, ob, version); \
access2<_Ob>::save_override(ar, ob, version); \
} \
} \
} \
ULIB_CLASS_EXPORT_IMPLEMENT(_Ob) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_SPECIALIZE_IS_VIRTUAL_BASE_OP, _Ob, \
BOOST_PP_TUPLE_TO_SEQ((__VA_ARGS__))) \
BOOST_PP_SEQ_FOR_EACH(_ULIB_DETAIL_UNINTRUSIVE_SERIALIZE_FUNC_OP, _Ob, \
_SERIALIZE_IMPL_SEQ) \
template <class ArchiveT> \
void boost::serialization::access2<_Ob>::save_override( \
ArchiveT &ar, _Ob &ob, const unsigned int version)
#define _ULIB_DETAIL_UNINTRUSIVE_AR_(name) \
boost::serialization::make_nvp(BOOST_PP_STRINGIZE(name), ob.name)
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
namespace detail {
struct Serializable {
/**
* Serializable trait to check if an object type is serializable.
* This only works if UNINTRUSIVE SERIALIZATION is applyed; in intrusive
* cases a has_serialize trait should be implemented
*/
template <class T>
struct serializable_trait : mpl::bool_<false> {};
/**
* IsA Serializable Implementation Template
*/
template <class T>
struct IsA : serializable_trait<T> {};
template <class ThisClass, class Archive>
struct serialize_baseobject {
ThisClass & m_object;
Archive & m_ar;
serialize_baseobject(ThisClass &o, Archive &ar) : m_object(o), m_ar(ar) {}
template <class T> void operator()(T &o) {
m_ar & boost::serialization::make_nvp(
typeid(T).name() ,
boost::serialization::base_object<T>(m_object));
}
};
/**
* Serializable trait to check if an object type is serializable.
* This only works if UNINTRUSIVE SERIALIZATION is applyed; in intrusive
* cases a has_serialize trait should be implemented
*/
template <class T> struct serializable_trait : mpl::bool_<false> {};
/**
* IsA Serializable Implementation Template
*/
template <class T> struct IsA : serializable_trait<T> {};
template <class ThisClass, class Archive> struct serialize_baseobject {
ThisClass &m_object;
Archive &m_ar;
serialize_baseobject(ThisClass &o, Archive &ar) : m_object(o), m_ar(ar) {}
template <class T> void operator()(T &o) {
m_ar &boost::serialization::make_nvp(
typeid(T).name(), boost::serialization::base_object<T>(m_object));
}
};
};
} // detail
} // namespace detail
struct Serializable {
friend class boost::serialization::access;
template <class T> friend class boost::serialization::access2;
virtual ~Serializable() {}
friend class boost::serialization::access;
template <class T> friend class boost::serialization::access2;
virtual ~Serializable() {}
protected:
};
} // uLib
} // namespace uLib
#endif // U_SERIALIZABLE_H

View File

@@ -23,8 +23,6 @@
//////////////////////////////////////////////////////////////////////////////*/
#ifndef U_CORE_TYPES_H
#define U_CORE_TYPES_H
@@ -33,253 +31,182 @@
#include <boost/preprocessor.hpp>
//#include <ltk/ltktypes.h>
// #include <ltk/ltktypes.h>
#include "Core/Macros.h"
#include "Core/Mpl.h"
namespace uLib {
////////////////////////////////////////////////////////////////////////////////
namespace detail {
struct TypeIntrospection {
// BOOST IMPL //
BOOST_MPL_HAS_XXX_TRAIT_DEF(type_info)
// BOOST IMPL //
BOOST_MPL_HAS_XXX_TRAIT_DEF(type_info)
// SFINAE IMPL //
/*
template <typename T>
struct has_type_info {
typedef char yes[1];
typedef char no[2];
template <typename U> static yes& test(typename U::type_info::BaseList*);
template <typename > static no& test(...);
// struct apply {
static const bool value = sizeof(test<T>(0)) == sizeof(yes);
typedef boost::mpl::bool_<value> type;
// };
};
*/
// SFINAE IMPL //
/*
template <typename T>
struct has_type_info {
typedef char yes[1];
typedef char no[2];
template <typename U> static yes& test(typename U::type_info::BaseList*);
template <typename > static no& test(...);
// struct apply {
static const bool value = sizeof(test<T>(0)) == sizeof(yes);
typedef boost::mpl::bool_<value> type;
// };
};
*/
/** IsA Introspectable Object Implementation Template */
template <class T>
struct IsIntrospectable : has_type_info<T> {};
/** IsA Introspectable Object Implementation Template */
template <class T> struct IsIntrospectable : has_type_info<T> {};
template <typename T> struct access {
typedef typename T::type_info type_info;
template <typename T> struct access {
typedef typename T::type_info type_info;
};
template <typename T> struct child_first_impl {
template <class T1, bool cond> struct lambda_CFList_f {
typedef mpl::vector<T1> type;
};
template <typename T>
struct child_first_impl {
template <class T1, bool cond>
struct lambda_CFList_f {
typedef mpl::vector<T1> type;
};
template <class T1>
struct lambda_CFList_f<T1,true> {
// typedef typename T1::type_info::CFList type;
typedef typename access<T1>::type_info::CFList type;
};
template <class T1>
struct lambda_CFList : lambda_CFList_f<T1, has_type_info<T1>::value> {};
/** Transforms all Base Type into proper CFList */
typedef typename mpl::transform_view < typename access<T>::type_info::BaseList
, lambda_CFList<mpl::_>
>::type CFListSeq;
/** Folds each CFList into a new sequence */
typedef typename mpl::fold< CFListSeq
, mpl::vector<>
, mpl::copy< mpl::_1
, mpl::back_inserter<mpl::_2>
>
>::type Childs;
/** Add This Class to final CFList sequence */
typedef typename mpl::copy< Childs
, mpl::back_inserter< mpl::vector<T> >
>::type type;
template <class T1> struct lambda_CFList_f<T1, true> {
// typedef typename T1::type_info::CFList type;
typedef typename access<T1>::type_info::CFList type;
};
template <class T1>
struct lambda_CFList : lambda_CFList_f<T1, has_type_info<T1>::value> {};
/**
* Tests if T has a member called type_info then compile type CFList
*/
template <typename T>
struct child_first : mpl::if_< has_type_info<T>
, child_first_impl<T>
, mpl::vector<>
>::type {};
/** Transforms all Base Type into proper CFList */
typedef
typename mpl::transform_view<typename access<T>::type_info::BaseList,
lambda_CFList<mpl::_>>::type CFListSeq;
/** Folds each CFList into a new sequence */
typedef typename mpl::fold<
CFListSeq, mpl::vector<>,
mpl::copy<mpl::_1, mpl::back_inserter<mpl::_2>>>::type Childs;
/** Add This Class to final CFList sequence */
typedef typename mpl::copy<Childs, mpl::back_inserter<mpl::vector<T>>>::type
type;
};
/**
* Tests if T has a member called type_info then compile type CFList
*/
template <typename T>
struct child_first
: mpl::if_<has_type_info<T>, child_first_impl<T>, mpl::vector<>>::type {};
};
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
// TYPE ADAPTERS // FINIRE !!!
//#define _REPETITION_V(vz,vn,vdata)
//template < class TypeList >
//class TypeAdapterInputInterface {
// virtual ~TypeAdapterInputInterface() {}
//public:
// #define _REPETITION_V(vz,vn,vdata)
// template < class TypeList >
// class TypeAdapterInputInterface {
// virtual ~TypeAdapterInputInterface() {}
// public:
// virtual void operator()(int val) {}
// virtual void operator()(std::string val) {}
//};
} // detail ////////////////////////////////////////////////////////////////////
} // namespace detail
#define CONSTEXPR BOOST_CONSTEXPR
//typedef ltk::Real_t Real_t;
// typedef ltk::Real_t Real_t;
#ifndef LTK_DOUBLE_PRECISION
typedef float Real_t;
typedef float Real_t;
#else
typedef double Real_t;
typedef double Real_t;
#endif
//typedef ltk::Id_t Id_t;
typedef id_t Id_t;
// typedef ltk::Id_t Id_t;
typedef id_t Id_t;
////typedef ltk::Size_t Size_t;
//typedef ltk::Pointer_t Pointer_t;
typedef void * Pointer_t;
typedef bool Bool_t; //Boolean (0=false, 1=true) (bool)
// typedef ltk::Pointer_t Pointer_t;
typedef void *Pointer_t;
typedef bool Bool_t; // Boolean (0=false, 1=true) (bool)
//--- bit manipulation ---------------------------------------------------------
#ifndef BIT
#define BIT(n) (1ULL << (n))
#define BIT(n) (1ULL << (n))
#endif
#ifndef SETBIT
#define SETBIT(n,i) ((n) |= BIT(i))
#define SETBIT(n, i) ((n) |= BIT(i))
#endif
#ifndef CLRBIT
#define CLRBIT(n,i) ((n) &= ~BIT(i))
#define CLRBIT(n, i) ((n) &= ~BIT(i))
#endif
#ifndef TESTBIT
#define TESTBIT(n,i) ((Bool_t)(((n) & BIT(i)) != 0))
#define TESTBIT(n, i) ((Bool_t)(((n) & BIT(i)) != 0))
#endif
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
// TYPE INTROSPECTION FOR OBJECTS //
#define uLibTypeMacro(thisClass,...) \
\
/* Friendship detail for accessing introspection */ \
template <typename> friend class uLib::detail::TypeIntrospection::access; \
\
/* type info structure*/ public: \
/* in GCC 4.8 must be public or dynamic_cast wont work */ \
struct type_info { \
/*WARNING: -std=c++0x required for this! */ \
constexpr static const char *name = BOOST_PP_STRINGIZE(thisClass); \
typedef BOOST_PP_VARIADIC_ELEM(0,__VA_ARGS__) BaseClass; \
typedef thisClass ThisClass; \
typedef uLib::mpl::vector<__VA_ARGS__,thisClass> TypeList; \
typedef uLib::mpl::vector<__VA_ARGS__> BaseList; \
typedef uLib::detail::TypeIntrospection::child_first<ThisClass>::type CFList; \
}; \
\
public: \
typedef type_info::BaseClass BaseClass; \
virtual const char *type_name() const { return type_info::name; } \
/* Object Props fwd declaration*/ \
struct ObjectProps; \
/**/
#define uLibTypeMacro(thisClass, ...) \
\
/* Friendship detail for accessing introspection */ \
template <typename> friend class uLib::detail::TypeIntrospection::access; \
\
/* type info structure*/ public: \
/* in GCC 4.8 must be public or dynamic_cast wont work */ \
struct type_info { \
/*WARNING: -std=c++0x required for this! */ \
constexpr static const char *name = BOOST_PP_STRINGIZE(thisClass); \
typedef BOOST_PP_VARIADIC_ELEM(0, __VA_ARGS__) BaseClass; \
typedef thisClass ThisClass; \
typedef uLib::mpl::vector<__VA_ARGS__, thisClass> TypeList; \
typedef uLib::mpl::vector<__VA_ARGS__> BaseList; \
typedef uLib::detail::TypeIntrospection::child_first<ThisClass>::type \
CFList; \
}; \
\
public: \
typedef type_info::BaseClass BaseClass; \
virtual const char *type_name() const { return type_info::name; } \
/**/
/**
* TypeList inheritance introspection
*/
struct TypeIntrospection {
template <typename T>
struct child_first : detail::TypeIntrospection::child_first<T> {};
template <typename T>
struct child_first : detail::TypeIntrospection::child_first<T> {};
};
// SISTEMARE //
struct PrintTypeId {
template <class T>
void operator()(T) const
{ std::cout << typeid(T).name() << std::endl; }
template <class T> void operator()(T) const {
std::cout << typeid(T).name() << std::endl;
}
template <typename SeqT>
static void PrintMplSeq(SeqT *p = NULL) { boost::mpl::for_each<SeqT>(PrintTypeId()); }
template <typename SeqT> static void PrintMplSeq(SeqT *p = NULL) {
boost::mpl::for_each<SeqT>(PrintTypeId());
}
template <typename Class>
static void PrintType(Class *p = NULL) { std::cout << typeid(Class).name() << std::endl; }
template <typename Class> static void PrintType(Class *p = NULL) {
std::cout << typeid(Class).name() << std::endl;
}
};
} // uLib
} // namespace uLib
#endif // U_CORE_TYPES_H

View File

@@ -16,7 +16,6 @@ set( TESTS
SerializeTest
SerializeDreadDiamondTest
DreadDiamondParameters
ObjectPropableTest
UuidTest
TypeIntrospectionTraversal
OptionsTest

View File

@@ -19,7 +19,6 @@ TESTS = SmartPointerTest \
SerializeTest \
SerializeDreadDiamondTest \
DreadDiamondParameters \
ObjectPropableTest \
TypeIntrospectionTraversal \
OptionsTest

View File

@@ -1,237 +0,0 @@
/*//////////////////////////////////////////////////////////////////////////////
// CMT Cosmic Muon Tomography project //////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
Copyright (c) 2014, Universita' degli Studi di Padova, INFN sez. di Padova
All rights reserved
Authors: Andrea Rigoni Garola < andrea.rigoni@pd.infn.it >
------------------------------------------------------------------
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 3.0 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library.
//////////////////////////////////////////////////////////////////////////////*/
#include <iostream>
#include <fstream>
#include <typeinfo>
#include <string>
#include "Core/Types.h"
#include "Core/Object.h"
#include "Core/ObjectProps.h"
#include "Core/StringReader.h"
#include "Math/Dense.h"
#include "boost/archive/text_oarchive.hpp"
#include "boost/archive/text_iarchive.hpp"
#include "testing-prototype.h"
using namespace uLib;
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
// STRUCTURES //
struct A : virtual Object {
uLibTypeMacro(A, Object)
properties() {
int p_a;
Vector3f p_3f;
};
int m_a;
};
void A::init_properties() {
$_init();
$$.p_a = 0;
$$.p_3f << 1,2,3;
}
ULIB_SERIALIZABLE_OBJECT(A)
ULIB_SERIALIZE_OBJECT(A, Object) { ar & AR(m_a); }
ULIB_SERIALIZE_OBJECT_PROPS(A) { ar & AR(p_a) & AR(p_3f); }
struct B : A {
uLibTypeMacro(B,A)
properties() {
std::string p;
};
B() : m_b(324) {}
int m_b;
};
void B::init_properties() {
$_init();
$$.p = "ciao";
}
ULIB_SERIALIZABLE_OBJECT(B)
ULIB_SERIALIZE_OBJECT(B,A) { ar & AR(m_b); }
ULIB_SERIALIZE_OBJECT_PROPS(B) { ar & AR(p); }
struct C {
int m_c;
std::string m_str;
};
ULIB_SERIALIZABLE(C)
ULIB_SERIALIZE(C) { ar & AR(m_c) & AR(m_str); }
struct D : virtual Object, B {
uLibTypeMacro(D,Object,B)
properties() {
C p_c;
};
};
void D::init_properties() {
$_init();
$$.p_c.m_c = 1234;
}
ULIB_SERIALIZABLE_OBJECT(D)
ULIB_SERIALIZE_OBJECT(D,Object) {}
ULIB_SERIALIZE_OBJECT_PROPS(D) {
ar & AR(p_c);
}
class E : public C, public D {
uLibTypeMacro(E,D,C)
public:
E() : m_Ea(5552368) {}
int m_Ea;
};
ULIB_SERIALIZABLE_OBJECT(E)
ULIB_SERIALIZE_OBJECT(E,C,D) {
ar & AR(m_Ea);
}
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
// TESTS //
int test_xml_direct() {
// TEST ARCHIVE SAVE AND LOAD direct //
E o; o.init_properties();
o.$$.p_c.m_str = "works";
{
std::ofstream file("test.xml");
Archive::xml_oarchive ar(file);
ar << NVP(o);
}
o.$$.p_c.m_str = "hola";
{
std::ifstream file("test.xml");
Archive::xml_iarchive ar(file);
ar >> NVP(o);
}
std::cout << o.$$.p_c.m_str << "\n";
return ( o.$$.p_c.m_str == "works" );
}
int test_xml_pointer() {
// TEST ARCHIVE SAVE AND LOAD from pointer //
E *o = new E; o->init_properties();
o->$$.p_c.m_str = "works";
{
std::ofstream file("test.xml");
Archive::xml_oarchive ar(file);
ar << NVP(o);
}
o->$$.p_c.m_str = "hola";
{
std::ifstream file("test.xml");
Archive::xml_iarchive ar(file);
ar >> NVP(o);
}
std::cout << o->$$.p_c.m_str << "\n";
return ( o->$$.p_c.m_str == "works" );
}
int test_xml_objsave() {
// TEST SELF SAVE
E o; o.init_properties();
o.$(B).p = "works";
{
std::ofstream file("test.xml");
Object::SaveXml(file,o);
}
o.$(B).p = "hola";
{
std::ifstream file("test.xml");
Object::LoadXml(file,o);
}
std::cout << o.$(B).p << "\n";
return ( o.$(B).p == "works" );
}
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
// MAIN //
int main()
{
BEGIN_TESTING(PropableTest);
TEST1( test_xml_direct() );
TEST1( test_xml_pointer() );
TEST1( test_xml_objsave() );
END_TESTING;
}

View File

@@ -1,37 +1,7 @@
#set(HEADERS
# DetectorChamber.h
# ExperimentFitEvent.h
# GeantEvent.h
# HitMC.h
# MuonScatter.h
# MuonEvent.h
# MuonError.h
# ChamberHitEvent.h
# Hit.h
# LinearFit.h
# Solid.h
# Matter.h
# Scene.h
#)
#set(SOURCES
# Solid.cpp
# Scene.cpp
#)
#set(LIBRARIES
# ${Boost_SERIALIZATION_LIBRARY}
# ${Boost_SIGNALS_LIBRARY}
# ${Boost_PROGRAM_OPTIONS_LIBRARY}
# ${Eigen_LIBRARY}
# ${Geant4_LIBRARIES}
# ${ROOT_LIBRARIES}
# ${PACKAGE_LIBPREFIX}Core
# ${PACKAGE_LIBPREFIX}Math
#)
set(HEADERS MuonScatter.h MuonError.h MuonEvent.h)
uLib_add_shared_library(${uLib-module})
add_subdirectory(testing)
set(ULIB_SELECTED_MODULES ${ULIB_SELECTED_MODULES} Detectors PARENT_SCOPE)
install(FILES ${HEADERS}
DESTINATION ${INSTALL_INC_DIR}/Detectors)

View File

@@ -27,6 +27,8 @@
#ifndef U_MATH_BITCODE_H
#define U_MATH_BITCODE_H
#include <iostream>
#include <boost/static_assert.hpp>
#include <boost/type_traits.hpp>
#include <boost/mpl/vector_c.hpp>
@@ -34,6 +36,7 @@
#include <Math/Dense.h>
namespace uLib {

View File

@@ -1,53 +1,60 @@
# HEADERS
set(HEADERS
ContainerBox.h
Dense.h
Geometry.h
Transform.h
StructuredData.h
StructuredGrid.h
VoxImage.h
VoxRaytracer.h
Utils.h
VoxImageFilter.h
VoxImageFilter.hpp
VoxImageFilterLinear.hpp
VoxImageFilterMedian.hpp
VoxImageFilterABTrim.hpp
VoxImageFilterBilateral.hpp
VoxImageFilterThreshold.hpp
VoxImageFilter2ndStat.hpp
VoxImageFilterCustom.hpp
Accumulator.h
TriangleMesh.h
BitCode.h
Structured2DGrid.h
Structured4DGrid.h
)
set(HEADERS ContainerBox.h
Dense.h
Geometry.h
Transform.h
StructuredData.h
StructuredGrid.h
VoxImage.h
VoxRaytracer.h
Utils.h
VoxImageFilter.h
VoxImageFilter.hpp
VoxImageFilterLinear.hpp
VoxImageFilterMedian.hpp
VoxImageFilterABTrim.hpp
VoxImageFilterBilateral.hpp
VoxImageFilterThreshold.hpp
VoxImageFilter2ndStat.hpp
VoxImageFilterCustom.hpp
Accumulator.h
TriangleMesh.h
BitCode.h
Structured2DGrid.h
Structured4DGrid.h)
set(SOURCES VoxRaytracer.cpp
StructuredData.cpp
StructuredGrid.cpp
VoxImage.cpp
TriangleMesh.cpp
Dense.cpp
Structured2DGrid.cpp
Structured4DGrid.cpp)
set(LIBRARIES Eigen3::Eigen
${ROOT_LIBRARIES}
${VTK_LIBRARIES})
set(libname ${PACKAGE_LIBPREFIX}Math)
set(ULIB_SHARED_LIBRARIES ${ULIB_SHARED_LIBRARIES} ${libname} PARENT_SCOPE)
set(ULIB_SELECTED_MODULES ${ULIB_SELECTED_MODULES} Math PARENT_SCOPE)
add_library(${libname} SHARED ${SOURCES})
set_target_properties(${libname} PROPERTIES
VERSION ${PROJECT_VERSION}
SOVERSION ${PROJECT_SOVERSION})
target_link_libraries(${libname} ${LIBRARIES})
# SOURCES
set(SOURCES
VoxRaytracer.cpp
StructuredData.cpp
StructuredGrid.cpp
VoxImage.cpp
TriangleMesh.cpp
Dense.cpp
Structured2DGrid.cpp
Structured4DGrid.cpp
)
install(TARGETS ${libname}
EXPORT "${PROJECT_NAME}Targets"
RUNTIME DESTINATION ${INSTALL_BIN_DIR} COMPONENT bin
LIBRARY DESTINATION ${INSTALL_LIB_DIR} COMPONENT lib)
set(LIBRARIES
${Boost_SERIALIZATION_LIBRARY}
${Boost_SIGNALS_LIBRARY}
${Boost_PROGRAM_OPTIONS_LIBRARY}
${Eigen_LIBRARY}
${ROOT_LIBRARIES}
${PACKAGE_LIBPREFIX}Core
)
install(FILES ${HEADERS} DESTINATION ${INSTALL_INC_DIR}/Math)
# TESTING
# include(uLibTargetMacros)
# add_subdirectory(testing)
uLib_add_shared_library(${uLib-module})
add_subdirectory(testing)

View File

@@ -23,9 +23,6 @@
//////////////////////////////////////////////////////////////////////////////*/
/*
* <one line to give the program's name and a brief idea of what it does.>
* Copyright (C) 2012 Andrea Rigoni Garola <andrea@pcimg05>
@@ -47,7 +44,6 @@
*
*/
#ifndef ULIB_DENSEMATRIX_H
#define ULIB_DENSEMATRIX_H
@@ -55,27 +51,29 @@
#include <Eigen/Dense>
//// BOOST SERIALIZATION ///////////////////////////////////////////////////////
#include <boost/algorithm/string.hpp>
#include <boost/algorithm/string/split.hpp>
#include <boost/algorithm/string/trim.hpp>
#include <boost/lexical_cast.hpp>
#include <boost/serialization/string.hpp>
#include <boost/serialization/array.hpp>
#include <boost/serialization/string.hpp>
namespace boost {
namespace serialization {
template<class Archive, class Scalar, int RowsAtCompileTime, int ColsAtCompileTime>
void serialize(Archive & ar, ::Eigen::Matrix<Scalar, RowsAtCompileTime, ColsAtCompileTime> & m, const unsigned int /*version*/) {
ar & boost::serialization::make_array(m.data(), RowsAtCompileTime * ColsAtCompileTime);
template <class Archive, class Scalar, int RowsAtCompileTime,
int ColsAtCompileTime>
void serialize(Archive &ar,
::Eigen::Matrix<Scalar, RowsAtCompileTime, ColsAtCompileTime> &m,
const unsigned int /*version*/) {
ar &boost::serialization::make_array(m.data(),
RowsAtCompileTime * ColsAtCompileTime);
}
} // serialization
} // boost
} // namespace serialization
} // namespace boost
////////////////////////////////////////////////////////////////////////////////
@@ -84,178 +82,163 @@ void serialize(Archive & ar, ::Eigen::Matrix<Scalar, RowsAtCompileTime, ColsAtCo
// this is needed by boost::lexical_cast to cope with Eigens Vectors ///////////
namespace Eigen {
template <typename T, int size>
std::istream & operator >> (std::istream &is, Eigen::Matrix<T,size,1> &vec) {
std::string str;
for( unsigned int i=0; i<size; i++) {
is >> std::skipws;
is >> str;
if(is.fail()) vec(i) = 0;
else vec(i) = boost::lexical_cast<T>(str);
}
return is;
std::istream &operator>>(std::istream &is, Eigen::Matrix<T, size, 1> &vec) {
std::string str;
for (unsigned int i = 0; i < size; i++) {
is >> std::skipws;
is >> str;
if (is.fail())
vec(i) = 0;
else
vec(i) = boost::lexical_cast<T>(str);
}
return is;
}
template <typename T, int size>
std::ostream & operator << (std::ostream &os, const Eigen::Matrix<T,size,1> &vec) {
os << vec.transpose();
return os;
std::ostream &operator<<(std::ostream &os,
const Eigen::Matrix<T, size, 1> &vec) {
os << vec.transpose();
return os;
}
} // Eigen
} // namespace Eigen
////////////////////////////////////////////////////////////////////////////////
namespace uLib {
typedef id_t Id_t;
typedef id_t Id_t;
typedef int Scalari;
typedef unsigned int Scalarui;
typedef long Scalarl;
typedef int Scalari;
typedef unsigned int Scalarui;
typedef long Scalarl;
typedef unsigned long Scalarul;
typedef float Scalarf;
typedef double Scalard;
typedef float Scalarf;
typedef double Scalard;
typedef Eigen::Matrix<int,1,1> Matrix1i;
typedef Eigen::Matrix<int, 1, 1> Matrix1i;
typedef Eigen::Matrix2i Matrix2i;
typedef Eigen::Matrix3i Matrix3i;
typedef Eigen::Matrix4i Matrix4i;
typedef Eigen::Matrix<float,1,1> Matrix1f;
typedef Eigen::Matrix<float, 1, 1> Matrix1f;
typedef Eigen::Matrix2f Matrix2f;
typedef Eigen::Matrix3f Matrix3f;
typedef Eigen::Matrix4f Matrix4f;
typedef Eigen::Matrix<int,1,1> Vector1i;
typedef Eigen::Matrix<int, 1, 1> Vector1i;
typedef Eigen::Vector2i Vector2i;
typedef Eigen::Vector3i Vector3i;
typedef Eigen::Vector4i Vector4i;
typedef Eigen::Matrix<float,1,1> Vector1f;
typedef Eigen::Matrix<float, 1, 1> Vector1f;
typedef Eigen::Vector2f Vector2f;
typedef Eigen::Vector3f Vector3f;
typedef Eigen::Vector4f Vector4f;
////////////////////////////////////////////////////////////////////////////////
// Vector String interaction ///////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
/*! Given a string consisting of a series of doubles with some
* delimiter, return an Eigen::Vector populated with those
* values, in the same order as they are given in the string.
*
* \param vec A double vector to be populated with the results
* \param str A string to be parsed as a series of doubles.
* \param delim Delimiters of the text (a typical default is " ," for comma and space-delimited text
*
*/
* delimiter, return an Eigen::Vector populated with those
* values, in the same order as they are given in the string.
*
* \param vec A double vector to be populated with the results
* \param str A string to be parsed as a series of doubles.
* \param delim Delimiters of the text (a typical default is " ," for comma and
* space-delimited text
*
*/
template <typename T, int size>
void VectorxT_StringTo(Eigen::Matrix<T,size,1> &vec, std::string str, const char *delim = " ,;\t\n") {
std::vector<std::string> strvec;
void VectorxT_StringTo(Eigen::Matrix<T, size, 1> &vec, std::string str,
const char *delim = " ,;\t\n") {
std::vector<std::string> strvec;
boost::algorithm::trim_if( str, boost::algorithm::is_any_of(delim));
boost::algorithm::split(strvec,str,boost::algorithm::is_any_of(delim), boost::algorithm::token_compress_on);
boost::algorithm::trim_if(str, boost::algorithm::is_any_of(delim));
boost::algorithm::split(strvec, str, boost::algorithm::is_any_of(delim),
boost::algorithm::token_compress_on);
for( unsigned int i=0; i<size; i++) {
vec(i) = boost::lexical_cast<T>(strvec[i]);
}
for (unsigned int i = 0; i < size; i++) {
vec(i) = boost::lexical_cast<T>(strvec[i]);
}
}
template <typename T, int size>
std::string VectorxT_ToString(const Eigen::Matrix<T,size,1> &vec) {
std::stringstream sst;
sst << vec.transpose();
return sst.str();
std::string VectorxT_ToString(const Eigen::Matrix<T, size, 1> &vec) {
std::stringstream sst;
sst << vec.transpose();
return sst.str();
}
//template <typename T, int size>
//Eigen::Matrix<T,size,1> & operator >> (std::istream &is, Eigen::Matrix<T,size,1> &vec) {
//}
// template <typename T, int size>
// Eigen::Matrix<T,size,1> & operator >> (std::istream &is,
// Eigen::Matrix<T,size,1> &vec) {
// }
template <typename T, int size>
void operator>> (std::string& str, Eigen::Matrix<T,size,1> &vec){
VectorxT_StringTo(vec,str);
void operator>>(std::string &str, Eigen::Matrix<T, size, 1> &vec) {
VectorxT_StringTo(vec, str);
}
////////////////////////////////////////////////////////////////////////////////
////// HOMOGENEOUS VECTORS //////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
template <bool p>
class _HPoint3f : public Eigen::Matrix< Scalarf,4,1 > {
template <bool p> class _HPoint3f : public Eigen::Matrix<Scalarf, 4, 1> {
public:
typedef Eigen::Matrix< Scalarf,4,1 > BaseClass;
typedef Eigen::Matrix<Scalarf, 4, 1> BaseClass;
_HPoint3f<p>() : BaseClass(0,0,0,p) {}
_HPoint3f<p>(float x,float y,float z) : BaseClass(x,y,z,p) {}
_HPoint3f<p>(Vector3f &in) : BaseClass(in.homogeneous()) { this->operator()(3) = p; }
_HPoint3f() : BaseClass(0, 0, 0, p) {}
_HPoint3f(float x, float y, float z) : BaseClass(x, y, z, p) {}
_HPoint3f(Vector3f &in) : BaseClass(in.homogeneous()) {
this->operator()(3) = p;
}
void operator delete(void* _p, size_t _s) {}
void operator delete(void *_p, size_t _s) {}
// This constructor allows to construct MyVectorType from Eigen expressions
template<typename OtherDerived>
inline _HPoint3f<p>(const Eigen::MatrixBase<OtherDerived>& other)
: BaseClass(other)
{ }
// This method allows to assign Eigen expressions to Vector3H
template<typename OtherDerived>
inline _HPoint3f<p> & operator= (const Eigen::MatrixBase <OtherDerived>& other)
{
this->BaseClass::operator=(other);
return *this;
}
// This constructor allows to construct MyVectorType from Eigen expressions
template <typename OtherDerived>
inline _HPoint3f(const Eigen::MatrixBase<OtherDerived> &other)
: BaseClass(other) {}
// This method allows to assign Eigen expressions to Vector3H
template <typename OtherDerived>
inline _HPoint3f &operator=(const Eigen::MatrixBase<OtherDerived> &other) {
this->BaseClass::operator=(other);
return *this;
}
};
typedef _HPoint3f<false> HVector3f;
typedef _HPoint3f<true> HPoint3f;
////////////////////////////////////////////////////////////////////////////////
////// HOMOGENEOUS LINE //////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
struct _HLine3f
{
HPoint3f origin;
HVector3f direction;
struct _HLine3f {
HPoint3f origin;
HVector3f direction;
};
typedef struct _HLine3f HLine3f;
inline std::ostream&
operator<< (std::ostream& stream, const HLine3f &line) {
stream << "HLine3f(" << "pt[" << line.origin.transpose() <<"] , dr[" << line.direction.transpose() << "]) ";
return stream;
inline std::ostream &operator<<(std::ostream &stream, const HLine3f &line) {
stream << "HLine3f(" << "pt[" << line.origin.transpose() << "] , dr["
<< line.direction.transpose() << "]) ";
return stream;
}
struct _HError3f
{
HVector3f position_error;
HVector3f direction_error;
struct _HError3f {
HVector3f position_error;
HVector3f direction_error;
};
typedef struct _HError3f HError3f;
inline std::ostream&
operator<< (std::ostream& stream, const HError3f &err) {
stream << "HError3f(" << "ept[" << err.position_error.transpose() <<"] , edr[" << err.direction_error.transpose() << "]) ";
return stream;
}
inline std::ostream &operator<<(std::ostream &stream, const HError3f &err) {
stream << "HError3f(" << "ept[" << err.position_error.transpose()
<< "] , edr[" << err.direction_error.transpose() << "]) ";
return stream;
}
} // namespace uLib
////////////////////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
@@ -269,13 +252,9 @@ ULIB_SERIALIZABLE(uLib::HPoint3f)
ULIB_SERIALIZABLE(uLib::HVector3f)
ULIB_SERIALIZABLE(uLib::HLine3f)
ULIB_SERIALIZABLE(uLib::HError3f)
#endif // ULIB_SERIALIZATION_ON
#endif // U_DENSEMATRIX_H
#endif // U_DENSEMATRIX_H

View File

@@ -110,6 +110,17 @@ public:
inline void Rotate(const Matrix3f &m) { this->m_T.rotate(m); }
inline void Rotate(const float angle, Vector3f axis)
{
axis.normalize(); // prehaps not necessary ( see eigens )
Eigen::AngleAxisf ax(angle,axis);
this->m_T.rotate(Eigen::Quaternion<float>(ax));
}
inline void Rotate(const Vector3f euler_axis) {
float angle = euler_axis.norm();
Rotate(angle,euler_axis);
}
inline void PreRotate(const Matrix3f &m) { this->m_T.prerotate(m); }

View File

@@ -30,6 +30,13 @@
#include "VoxImage.h"
#include <vtkSmartPointer.h>
#include <vtkImageData.h>
#include <vtkXMLImageDataReader.h>
#include <vtkXMLImageDataWriter.h>
#include <vtkStringArray.h>
#include <vtkInformation.h>
#include <vtkInformationStringKey.h>
namespace uLib {
@@ -83,7 +90,103 @@ void Abstract::VoxImage::ExportToVtk (const char *file, bool density_type)
printf("%s vtk file saved\n",file);
}
int Abstract::VoxImage::ImportFromVtk(const char *file)
void Abstract::VoxImage::ExportToVti (const char *file, bool density_type, bool compressed)
{
Abstract::VoxImage *voxels = this;
vtkSmartPointer<vtkImageData> image = vtkSmartPointer<vtkImageData>::New();
image->SetDimensions(voxels->GetDims()(0), voxels->GetDims()(1), voxels->GetDims()(2));
image->SetSpacing(voxels->GetSpacing()(0), voxels->GetSpacing()(1), voxels->GetSpacing()(2));
image->SetOrigin(voxels->GetPosition()(0), voxels->GetPosition()(1), voxels->GetPosition()(2));
image->AllocateScalars(VTK_FLOAT, 1);
float norm;
if (density_type) {
norm = 1;
} else norm = 1.E6;
int nx = voxels->GetDims()(0);
int ny = voxels->GetDims()(1);
int nz = voxels->GetDims()(2);
size_t npoints = nx*ny*nz;
float *scalar = static_cast<float*>(image->GetScalarPointer());
StructuredData unwrap(*voxels);
unwrap.SetDataOrder(StructuredData::XYZ); // move to XYZ order (VTK)
for (size_t i = 0; i < npoints; i++) {
Vector3i idx = unwrap.UnMap(i);
scalar[i] = static_cast<float>(voxels->GetValue(idx) * norm);
}
// Create a custom string key
static vtkInformationStringKey* ConfigNote =
vtkInformationStringKey::MakeKey("cmt.config", "Config");
// Attach metadata
vtkInformation *info = image->GetInformation();
info->Set(ConfigNote,
"This image was generated with uLib\n"
"-----------------------------------\n"
"Author: Andrea Rigoni\n"
"Version: 0.1\n"
"Date: 2025\n"
);
// std::cout << info->Get(ConfigNote) << std::endl;
vtkSmartPointer<vtkXMLImageDataWriter> writer = vtkSmartPointer<vtkXMLImageDataWriter>::New();
writer->SetFileName(file);
writer->SetInputData(image);
if(compressed) {
writer->SetDataModeToBinary();
writer->SetCompressorTypeToZLib();
}
writer->Write();
}
int Abstract::VoxImage::ImportFromVti(const char *file, bool density_type) {
vtkSmartPointer<vtkXMLImageDataReader> reader = vtkSmartPointer<vtkXMLImageDataReader>::New();
reader->SetFileName(file);
reader->Update();
vtkImageData *image = reader->GetOutput();
if(!image) return false;
Abstract::VoxImage *voxels = this;
int nx = image->GetDimensions()[0];
int ny = image->GetDimensions()[1];
int nz = image->GetDimensions()[2];
voxels->SetDims(Vector3i(nx,ny,nz));
voxels->SetSpacing(Vector3f(image->GetSpacing()[0],image->GetSpacing()[1],image->GetSpacing()[2]));
voxels->SetPosition(Vector3f(image->GetOrigin()[0],image->GetOrigin()[1],image->GetOrigin()[2]));
float norm;
if (density_type) {
norm = 1;
} else norm = 1.E6;
size_t npoints = nx*ny*nz;
float *scalar = static_cast<float*>(image->GetScalarPointer());
StructuredData wrap(*voxels);
wrap.SetDataOrder(StructuredData::XYZ);
for (size_t i = 0; i < npoints; i++) {
Vector3i idx = wrap.UnMap(i);
voxels->SetValue(idx, scalar[i] / norm);
}
return true;
}
int Abstract::VoxImage::ImportFromVtk(const char *file, bool density_type)
{
FILE * vtk_file = fopen(file, "r");
if (!vtk_file) return false;
@@ -115,14 +218,18 @@ int Abstract::VoxImage::ImportFromVtk(const char *file)
this->SetSpacing(Vector3f(sx,sy,sz));
this->SetPosition(Vector3f(ox,oy,oz));
float norm;
if (density_type) {
norm = 1;
} else norm = 1.E6;
for (int k = 0; k < dz; ++k) {
for (int j = 0; j < dy; ++j) {
for (int i = 0; i < dx; ++i) {
Vector3i idx(i, j, k);
float tmp_val;
fscanf(vtk_file, "%f", &tmp_val);
//this->SetValue(idx,fabs(tmp_val)*1E-6);
this->SetValue(idx,tmp_val*1E-6);
this->SetValue(idx,tmp_val / norm);
}
}
}

View File

@@ -56,8 +56,18 @@ public:
virtual void SetDims(const Vector3i &size) = 0;
void ExportToVtk(const char *file, bool density_type = 0);
// use this function to export to VTK binary format
void ExportToVti (const char *file, bool density_type = 0, bool compressed = 0);
// this function has been deprecated in favor of ExportToVti
// but it is kept for backward compatibility and because it
// does not depend on vtk library
void ExportToVtkXml(const char *file, bool density_type = 0);
int ImportFromVtk(const char *file);
int ImportFromVtk(const char *file, bool density_type = 0);
int ImportFromVti(const char *file, bool density_type = 0);
protected:

View File

@@ -28,11 +28,12 @@
#ifndef VOXIMAGEFILTERCUSTOM_HPP
#define VOXIMAGEFILTERCUSTOM_HPP
#include "Core/Macros.h"
#include <Math/Dense.h>
#include "Math/VoxImage.h"
#include "VoxImageFilter.h"
#define likely(expr) __builtin_expect(!!(expr), 1)
////////////////////////////////////////////////////////////////////////////////
///// VOXIMAGE FILTER CUSTOM /////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////

View File

@@ -23,13 +23,12 @@
//////////////////////////////////////////////////////////////////////////////*/
#include <iostream>
#include "VoxRaytracer.h"
#include "Utils.h"
#include "VoxRaytracer.h"
#include "Core/Macros.h"
#define unlikely(expr) __builtin_expect(!!(expr), 0)
inline float fast_sign(float f) { return 1 - 2 * (f < 0); }
@@ -39,215 +38,206 @@ namespace uLib {
///// RAY DATA /////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
void VoxRaytracer::RayData::AddElement(Id_t id, float L)
{
Element el = {id, L};
m_Data.push_back(el);
m_TotalLength += L;
void VoxRaytracer::RayData::AddElement(Id_t id, float L) {
Element el = {id, L};
m_Data.push_back(el);
m_TotalLength += L;
}
void VoxRaytracer::RayData::AppendRay(const VoxRaytracer::RayData &in)
{
if (unlikely(!in.m_Data.size())) {
std::cout << "Warinig: PoCA on exit border!\n";
return;
}
else if (unlikely(!m_Data.size())) {
m_Data = in.m_Data;
std::cout << "Warinig: PoCA on entrance border!\n";
return;
}
else {
// Opzione 1) un voxel in piu' //
m_Data.reserve(m_Data.size() + in.m_Data.size());
m_Data.insert(m_Data.end(), in.m_Data.begin(), in.m_Data.end());
// Opzione 2) merge dei voxel nel poca.
// RayData::Element &e1 = m_Data.back();
// const RayData::Element &e2 = in.m_Data.front();
// if(e1.vox_id == e2.vox_id)
// {
// m_Data.reserve(m_Data.size() + in.m_Data.size() - 1);
// e1.L += e2.L; //fix//
// m_Data.insert(m_Data.end(), in.m_Data.begin()+1, in.m_Data.end());
// }
// else {
// m_Data.reserve(m_Data.size() + in.m_Data.size());
// m_Data.insert(m_Data.end(), in.m_Data.begin(), in.m_Data.end());
// }
m_TotalLength += in.m_TotalLength;
void VoxRaytracer::RayData::AppendRay(const VoxRaytracer::RayData &in) {
if (unlikely(!in.m_Data.size())) {
std::cout << "Warinig: PoCA on exit border!\n";
return;
} else if (unlikely(!m_Data.size())) {
m_Data = in.m_Data;
std::cout << "Warinig: PoCA on entrance border!\n";
return;
} else {
// Opzione 1) un voxel in piu' //
if (in.m_Data.size() > 0) {
m_Data.insert(m_Data.end(), in.m_Data.begin(), in.m_Data.end());
}
// Opzione 2) merge dei voxel nel poca.
// RayData::Element &e1 = m_Data.back();
// const RayData::Element &e2 = in.m_Data.front();
// if(e1.vox_id == e2.vox_id)
// {
// m_Data.reserve(m_Data.size() + in.m_Data.size() - 1);
// e1.L += e2.L; //fix//
// m_Data.insert(m_Data.end(), in.m_Data.begin()+1,
// in.m_Data.end());
// }
// else {
// m_Data.reserve(m_Data.size() + in.m_Data.size());
// m_Data.insert(m_Data.end(), in.m_Data.begin(),
// in.m_Data.end());
// }
m_TotalLength += in.m_TotalLength;
}
}
void VoxRaytracer::RayData::PrintSelf(std::ostream &o)
{
o << "Ray: total lenght " << m_TotalLength << "\n";
std::vector<Element>::iterator it;
for(it = m_Data.begin(); it < m_Data.end(); ++it)
o << "[ " << (*it).vox_id << ", " << (*it).L << "] \n";
void VoxRaytracer::RayData::PrintSelf(std::ostream &o) {
o << "Ray: total lenght " << m_TotalLength << "\n";
std::vector<Element>::iterator it;
for (it = m_Data.begin(); it < m_Data.end(); ++it)
o << "[ " << (*it).vox_id << ", " << (*it).L << "] \n";
}
////////////////////////////////////////////////////////////////////////////////
//// RAY TRACER ////////////////////////////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
bool VoxRaytracer::GetEntryPoint(const HLine3f &line, HPoint3f &pt) {
Vector4f s = m_Image->GetLocalPoint(line.direction);
pt = m_Image->GetLocalPoint(line.origin);
bool VoxRaytracer::GetEntryPoint(const HLine3f &line, HPoint3f &pt)
{
Vector4f s = m_Image->GetLocalPoint(line.direction);
pt = m_Image->GetLocalPoint(line.origin);
// Considers Structured grid dimensions //
Vector4f dims = m_Image->GetDims().homogeneous().cast<float>();
pt = pt.cwiseQuotient(dims);
s = s.cwiseQuotient(dims);
// Considers Structured grid dimensions //
Vector4f dims = m_Image->GetDims().homogeneous().cast<float>();
pt = pt.cwiseQuotient(dims);
s = s.cwiseQuotient(dims);
float l = s.head(3).norm();
Vector3f L(l / s(0), l / s(1), l / s(2));
float l = s.head(3).norm();
Vector3f L(l/s(0), l/s(1), l/s(2));
Vector3f offset;
for (int i = 0; i < 3; ++i)
offset(i) = (s(i) > 0) - (pt(i) - floor(pt(i)));
offset = offset.cwiseProduct(L).cwiseAbs();
Vector3f offset;
for(int i=0;i<3;++i)
offset(i) = (s(i)>0) - (pt(i)-floor(pt(i))) ;
offset = offset.cwiseProduct(L).cwiseAbs();
int id; float d;
for(int loop=0; loop<8; loop++)
{
int check_border = 0;
for ( int i=0; i<3 ;++i) {
check_border += pt(i) > 1;
check_border += pt(i) < 0;
}
if(check_border == 0) {
for(int i=0;i<3;++i)
pt(i) *= (float)dims(i);
pt = m_Image->GetWorldPoint(pt);
return true;
}
d = offset.minCoeff(&id);
for(int i=0; i<3; ++i)
pt(i) += d / L(i);
pt(id) = rintf(pt(id));
offset.array() -= d;
offset(id) = fabs(L(id));
int id;
float d;
for (int loop = 0; loop < 8; loop++) {
int check_border = 0;
for (int i = 0; i < 3; ++i) {
check_border += pt(i) > 1;
check_border += pt(i) < 0;
}
for(int i=0;i<3;++i)
if (check_border == 0) {
for (int i = 0; i < 3; ++i)
pt(i) *= (float)dims(i);
pt = m_Image->GetWorldPoint(pt);
return false;
}
bool VoxRaytracer::GetExitPoint(const HLine3f &line, HPoint3f &pt)
{
HLine3f out = line;
out.direction *= -1;
return GetEntryPoint(out,pt);
}
VoxRaytracer::RayData VoxRaytracer::TraceBetweenPoints(const HPoint3f &in,
const HPoint3f &out)
const
{
RayData ray;
Vector4f pt1 = m_Image->GetLocalPoint(in);
Vector4f pt2 = m_Image->GetLocalPoint(out);
Vector4f s = pt2 - pt1;
float l = s.head(3).norm();
Vector3f L(l/s(0), l/s(1), l/s(2));
// Vector3f scale; // FIXXX
// scale << (m_Image->GetWorldMatrix() * Vector4f(1,0,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,1,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,0,1,0)).norm();
Vector3f offset;
for(int i=0;i<3;++i) offset(i) = (s(i)>=0) - (pt1(i)-floor(pt1(i))) ;
offset = offset.cwiseProduct(L).cwiseAbs();
L = L.cwiseAbs();
//---- Check if the ray only crosses one voxel
Vector3i vid = m_Image->Find(in);
if(vid == m_Image->Find(out)){
ray.AddElement(m_Image->Map(vid),s.norm());
return ray;
pt = m_Image->GetWorldPoint(pt);
return true;
}
//---- Otherwise, loop until ray is finished
int id; float d;
while(l>0){
d = offset.minCoeff(&id);
for (int i = 0; i < 3; ++i)
pt(i) += d / L(i);
d = offset.minCoeff(&id);
pt(id) = rintf(pt(id));
if(m_Image->IsInsideGrid(vid)){
ray.AddElement(m_Image->Map(vid), d * m_scale(id) );
}
offset.array() -= d;
offset(id) = fabs(L(id));
}
for (int i = 0; i < 3; ++i)
pt(i) *= (float)dims(i);
pt = m_Image->GetWorldPoint(pt);
return false;
}
// nan check //
// if(unlikely(!isFinite(d * scale(id)))) {
// std:: cout << "NAN in raytracer\n";
// exit(1);
// }
bool VoxRaytracer::GetExitPoint(const HLine3f &line, HPoint3f &pt) {
HLine3f out = line;
out.direction *= -1;
return GetEntryPoint(out, pt);
}
vid(id) += (int)fast_sign(s(id));
VoxRaytracer::RayData
VoxRaytracer::TraceBetweenPoints(const HPoint3f &in,
const HPoint3f &out) const {
RayData ray;
Vector4f pt1 = m_Image->GetLocalPoint(in);
Vector4f pt2 = m_Image->GetLocalPoint(out);
Vector4f s = pt2 - pt1;
l -= d;
offset.array() -= d;
offset(id) = fmin(L(id),l);
}
float l = s.head(3).norm();
Vector3f L(l / s(0), l / s(1), l / s(2));
// Vector3f scale; // FIXXX
// scale << (m_Image->GetWorldMatrix() * Vector4f(1,0,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,1,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,0,1,0)).norm();
Vector3f offset;
for (int i = 0; i < 3; ++i)
offset(i) = (s(i) >= 0) - (pt1(i) - floor(pt1(i)));
offset = offset.cwiseProduct(L).cwiseAbs();
L = L.cwiseAbs();
//---- Check if the ray only crosses one voxel
Vector3i vid = m_Image->Find(in);
if (vid == m_Image->Find(out)) {
ray.AddElement(m_Image->Map(vid), s.norm());
return ray;
}
//---- Otherwise, loop until ray is finished
int id;
float d;
while (l > 0) {
d = offset.minCoeff(&id);
if (m_Image->IsInsideGrid(vid)) {
ray.AddElement(m_Image->Map(vid), d * m_scale(id));
}
// nan check //
// if(unlikely(!isFinite(d * scale(id)))) {
// std:: cout << "NAN in raytracer\n";
// exit(1);
// }
vid(id) += (int)fast_sign(s(id));
l -= d;
offset.array() -= d;
offset(id) = fmin(L(id), l);
}
return ray;
}
// 20150528 SV for absorbed muons
VoxRaytracer::RayData VoxRaytracer::TraceLine(const HLine3f &line) const
{
RayData ray;
VoxRaytracer::RayData VoxRaytracer::TraceLine(const HLine3f &line) const {
RayData ray;
Vector4f pt = m_Image->GetLocalPoint(line.origin);
Vector4f s = m_Image->GetLocalPoint(line.direction);
Vector4f pt = m_Image->GetLocalPoint(line.origin);
Vector4f s = m_Image->GetLocalPoint(line.direction);
float l = s.head(3).norm();
// intersection between track and grid when spacing is +1
Vector3f L(l/s(0), l/s(1), l/s(2));
float l = s.head(3).norm();
// intersection between track and grid when spacing is +1
Vector3f L(l / s(0), l / s(1), l / s(2));
// RayTracer works with a grid of interspace +1
// Vector3f scale; // FIXXX
// scale << (m_Image->GetWorldMatrix() * Vector4f(1,0,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,1,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,0,1,0)).norm();
// RayTracer works with a grid of interspace +1
// Vector3f scale; // FIXXX
// scale << (m_Image->GetWorldMatrix() * Vector4f(1,0,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,1,0,0)).norm(),
// (m_Image->GetWorldMatrix() * Vector4f(0,0,1,0)).norm();
// offset is the fraction of the segment between grid lines when origin is insiede voxel
// cwiseAbs for having positive distances
Vector3f offset;
for(int i=0;i<3;++i)
offset(i) = (s(i)>=0) - (pt(i)-floor(pt(i)));
offset = offset.cwiseProduct(L).cwiseAbs();
L = L.cwiseAbs();
// offset is the fraction of the segment between grid lines when origin is
// insiede voxel cwiseAbs for having positive distances
Vector3f offset;
for (int i = 0; i < 3; ++i)
offset(i) = (s(i) >= 0) - (pt(i) - floor(pt(i)));
offset = offset.cwiseProduct(L).cwiseAbs();
L = L.cwiseAbs();
int id; float d;
Vector3i vid = m_Image->Find(line.origin);
while(m_Image->IsInsideGrid(vid))
{
// minimun coefficient of offset: id is the coordinate, d is the value
// dependig on which grid line horizontal or vertical it is first intercept
d = offset.minCoeff(&id);
int id;
float d;
Vector3i vid = m_Image->Find(line.origin);
while (m_Image->IsInsideGrid(vid)) {
// minimun coefficient of offset: id is the coordinate, d is the value
// dependig on which grid line horizontal or vertical it is first intercept
d = offset.minCoeff(&id);
// add Lij to ray
ray.AddElement(m_Image->Map(vid), d * m_scale(id) );
// add Lij to ray
ray.AddElement(m_Image->Map(vid), d * m_scale(id));
// move to the next voxel
vid(id) += (int)fast_sign(s(id));
// move to the next voxel
vid(id) += (int)fast_sign(s(id));
offset.array() -= d;
offset(id) = L(id);
}
return ray;
offset.array() -= d;
offset(id) = L(id);
}
return ray;
}
}
} // namespace uLib

View File

@@ -19,4 +19,4 @@ set(LIBRARIES
${PACKAGE_LIBPREFIX}Math
)
uLib_add_tests(${uLib-module})
uLib_add_tests(Math)

View File

@@ -92,6 +92,20 @@ int main() {
imgR.ExportToVtk("./read_and_saved.vtk");
}
{
VoxImage<TestVoxel> img(Vector3i(4,4,4));
img.InitVoxels({0,0});
for (int i=0; i<4; i++) {
for (int j=0; j<4; j++) {
for (int k=0; k<4; k++) {
img[Vector3i(i,j,k)] = {i+j+k,0};
}
}
}
img.ExportToVti("./vti_saved.vti",0,1);
// img.ImportFromVtkXml("./test_vox_image.vti");
}
{
VoxImage<TestVoxel> img1(Vector3i(5,5,5));

View File

@@ -1,55 +1,65 @@
set(HEADERS
TestTObject.h
RootMathDense.h
RootMuonScatter.h
RootHitRaw.h
muBlastHit.h
muBlastMCTrack.h
muCastorMCTrack.h
muCastorHit.h
muCastorInfo.h
)
set(HEADERS RootMathDense.h
RootMuonScatter.h
RootHitRaw.h
muCastorMCTrack.h
muCastorHit.h
muCastorInfo.h
muCastorSkinHit.h
muCastorPrimaryVertex.h
muCastorMuDetDIGI.h
SkinDetectorWriter.h)
set(DICTIONARY_HEADERS
TestTObject.h
RootMathDense.h
RootMuonScatter.h
RootHitRaw.h
muBlastHit.h
muBlastMCTrack.h
muCastorMCTrack.h
muCastorHit.h
muCastorInfo.h
)
set(SOURCES ${HEADERS} RootMuonScatter.cpp
muCastorMCTrack.cpp
muCastorHit.cpp
muCastorInfo.cpp
muCastorSkinHit.cpp
muCastorPrimaryVertex.cpp
muCastorMuDetDIGI.cpp
SkinDetectorWriter.cpp)
SET(SOURCES
TestTObject.cpp
RootMuonScatter.cpp
muBlastHit.cpp
muBlastMCTrack.cpp
muCastorMCTrack.cpp
muCastorHit.cpp
muCastorInfo.cpp
)
set(DICTIONARY_HEADERS muCastorMCTrack.h
muCastorHit.h
muCastorInfo.h
muCastorSkinHit.h
muCastorPrimaryVertex.h
muCastorMuDetDIGI.h
SkinDetectorWriter.h)
set(LIBRARIES
# ${Boost_SERIALIZATION_LIBRARY}
# ${Boost_SIGNALS_LIBRARY}
# ${Boost_PROGRAM_OPTIONS_LIBRARY}
${ROOT_LIBRARIES}
${PACKAGE_LIBPREFIX}Core
${PACKAGE_LIBPREFIX}Math
)
set(LIBRARIES ${ROOT_LIBRARIES}
${PACKAGE_LIBPREFIX}Math)
include(FindROOTv6)
root_generate_dictionary(uLibRootDict ${DICTIONARY_HEADERS} LINKDEF Linkdef.h)
set_source_files_properties(uLibRootDict.cxx PROPERTIES GENERATED TRUE)
set_source_files_properties(uLibRootDict.h PROPERTIES GENERATED TRUE)
list(APPEND SOURCES uLibRootDict.cxx)
set(rDictName ${PACKAGE_LIBPREFIX}RootDict)
root_generate_dictionary(${rDictName} ${DICTIONARY_HEADERS}
LINKDEF Linkdef.h)
set_source_files_properties(${rDictName}.cxx
PROPERTIES GENERATED TRUE)
set_source_files_properties(${rDictName}.h
PROPERTIES GENERATED TRUE)
list(APPEND SOURCES ${rDictName}.cxx)
# TODO use a custom target linked to root_generate_dictionary
install(FILES ${CMAKE_CURRENT_BINARY_DIR}/uLibRootDict_rdict.pcm
DESTINATION ${PACKAGE_INSTALL_LIB_DIR})
set(R_ARTIFACTS ${CMAKE_CURRENT_BINARY_DIR}/lib${rDictName}_rdict.pcm
${CMAKE_CURRENT_BINARY_DIR}/lib${rDictName}.rootmap)
install(FILES ${R_ARTIFACTS}
DESTINATION ${INSTALL_LIB_DIR})
set(libname ${PACKAGE_LIBPREFIX}Root)
set(ULIB_SHARED_LIBRARIES ${ULIB_SHARED_LIBRARIES} ${libname} PARENT_SCOPE)
set(ULIB_SELECTED_MODULES ${ULIB_SELECTED_MODULES} Root PARENT_SCOPE)
add_library(${libname} SHARED ${SOURCES})
set_target_properties(${libname} PROPERTIES
VERSION ${PROJECT_VERSION}
SOVERSION ${PROJECT_SOVERSION}
CXX_STANDARD 17)
target_link_libraries(${libname} ${LIBRARIES})
install(TARGETS ${libname}
EXPORT "${PROJECT_NAME}Targets"
RUNTIME DESTINATION ${INSTALL_BIN_DIR} COMPONENT bin
LIBRARY DESTINATION ${INSTALL_LIB_DIR} COMPONENT lib)
install(FILES ${HEADERS} DESTINATION ${INSTALL_INC_DIR}/Root)
uLib_add_shared_library(${uLib-module})
add_subdirectory(testing)

View File

@@ -23,8 +23,6 @@
//////////////////////////////////////////////////////////////////////////////*/
#ifndef U_ROOT_LINKDEF_H
#define U_ROOT_LINKDEF_H
@@ -35,50 +33,21 @@
#pragma link off all functions;
#pragma link C++ nestedclasses;
#pragma link C++ class TestTObject+;
using namespace ROOT::Mutom;
#pragma link C++ class ROOT::Math::Cartesian2D<int>+;
#pragma link C++ class ROOT::Math::Cartesian2D<float>+;
#pragma link C++ class ROOT::Math::Cartesian2D<double>+;
#pragma link C++ class ROOT::Math::Cartesian3D<int>+;
#pragma link C++ class ROOT::Math::Cartesian3D<float>+;
#pragma link C++ class ROOT::Math::Cartesian3D<double>+;
#pragma link C++ class Vector2i+;
#pragma link C++ class Vector2f+;
#pragma link C++ class Vector2d+;
#pragma link C++ class Vector3i+;
#pragma link C++ class Vector3f+;
#pragma link C++ class Vector3d+;
#pragma link C++ typedef Matrix3i;
#pragma link C++ typedef Matrix3f;
#pragma link C++ typedef Matrix3d;
#pragma link C++ class Line3f+;
#pragma link C++ class Line3d+;
#pragma link C++ class MuonTrack+;
#pragma link C++ class MuonScatter+;
#pragma link C++ function MuonScatter::p_mean() const;
#pragma link C++ class ROOT::Math::Cartesian3D < int> + ;
#pragma link C++ class ROOT::Math::Cartesian3D < float> + ;
#pragma link C++ class ROOT::Math::Cartesian3D < double> + ;
// #pragma link C++ class DetectorChamber+;
#pragma link C++ class HitRaw+;
#pragma link C++ function HitRaw::Chm() const;
#pragma link C++ function HitRaw::Rob() const;
#pragma link C++ function HitRaw::Tdc() const;
#pragma link C++ function HitRaw::Ch() const;
#pragma link C++ class muBlastMCTrack+;
#pragma link C++ class muBlastHit+;
#pragma link C++ class muCastorMCTrack+;
#pragma link C++ class muCastorHit+;
#pragma link C++ class muCastorInfo+;
#pragma link C++ class muCastorMCTrack + ;
#pragma link C++ class muCastorHit + ;
#pragma link C++ class muCastorInfo + ;
#pragma link C++ class muCastorSkinHit + ;
#pragma link C++ class muCastorPrimaryVertex + ;
#pragma link C++ class muCastorMuDetDIGI + ;
#pragma link C++ class SkinDetectorWriter + ;
#endif // __CINT__

View File

@@ -0,0 +1,47 @@
#include "SkinDetectorWriter.h"
#include "muCastorSkinHit.h"
#include "TVector3.h"
SkinDetectorWriter::SkinDetectorWriter(string filename) :
t_file(nullptr),
t_tree(nullptr),
t_buffer(nullptr),
i_status(0)
{
t_file = new TFile(filename.c_str(), "RECREATE");
t_tree = new TTree("muCastorMC", "muCastorMC");
t_buffer = new TClonesArray("muCastorSkinHit");
t_tree->Branch("CastorSkinHits", "TClonesArray", t_buffer, 32000, 99);
if (t_file->IsZombie()) i_status = 1;
}
SkinDetectorWriter::~SkinDetectorWriter()
{}
void SkinDetectorWriter::add(int detID, float p_x, float p_y, float p_z,
float m_x, float m_y, float m_z)
{
TClonesArray& ref = *t_buffer;
int size = ref.GetEntriesFast();
muCastorSkinHit* new_hit = new(ref[size]) muCastorSkinHit();
new_hit->SetDetID(detID);
new_hit->SetPdgCode(13);
new_hit->SetMotherID(-1);
new_hit->SetPos (TVector3(p_x, p_y, p_z));
new_hit->SetMom (TVector3(m_x, m_y, m_z));
}
void SkinDetectorWriter::write()
{
if (t_tree->Fill() < 0) i_status = 2;
t_buffer->Delete(); // or t_buffer->Clear() ??
}
void SkinDetectorWriter::close()
{
if (t_tree->Write() == 0) i_status = 3;
t_file->Close();
}

View File

@@ -0,0 +1,32 @@
#ifndef SkinDetectorWriter_h
#define SkinDetectorWriter_h
#include <string>
#include "TFile.h"
#include "TTree.h"
#include "TClonesArray.h"
using std::string;
class SkinDetectorWriter
{
public:
SkinDetectorWriter(string filename);
virtual ~SkinDetectorWriter();
void add(int detID, float p_x, float p_y, float p_z, float m_x, float m_y, float m_z);
int status() { return i_status; }
void write();
void close();
private:
TFile* t_file;
TTree* t_tree;
TClonesArray* t_buffer;
int i_status;
};
#endif //SkinDetectorWriter_h

View File

@@ -9,6 +9,7 @@
// Martin Subieta martin.subieta@ing.unibs.it
//########################################
#include <iostream>
#include <vector>
#include "TObject.h"
#include "TParticle.h"

View File

@@ -9,6 +9,7 @@
// Martin Subieta martin.subieta@ing.unibs.it
//########################################
#include <iostream>
#include "vector"
#include "TObject.h"
#include "TParticle.h"

View File

@@ -0,0 +1,41 @@
/// \file muCastorMuDetDIGI.cxx
/// \brief Implementation of the muCastorMuDetDIGI class
// This class build the DIGI for the scintillator detectors
/// \author G. Bonomi, M. Subieta - INFN
#include <iostream>
#include "muCastorMuDetDIGI.h"
/// \cond CLASSIMP
ClassImp(muCastorMuDetDIGI)
/// \endcond
using namespace std;
//_____________________________________________________________________________
muCastorMuDetDIGI::muCastorMuDetDIGI() :
fDetID(-1),
fLayID(-1),
fTubID(-1),
fDistMC(0.),
fDriftMC(0.),
fDist(0.),
fDrift(0.),
fEnergy(0.)
{}
//_____________________________________________________________________________
muCastorMuDetDIGI::~muCastorMuDetDIGI()
{}
//_____________________________________________________________________________
void muCastorMuDetDIGI::Print(const Option_t* /*opt*/) const
{
cout << " DetID: " << fDetID
<< " LayID: " << fLayID
<< " TubID: " << fTubID
<< " energy deposit (keV): " << fEnergy
<< endl;
}

View File

@@ -0,0 +1,75 @@
#ifndef muCastor_MuDetDIGI_H
#define muCastor_MuDetDIGI_H
/// \file muCastorMuDetDIGI.h
/// \brief Definition of the muCastorMuDetDIGI class
///
/// \authors G. Bonomi, M. Subieta - INFN
#include <TObject.h>
class muCastorMuDetDIGI : public TObject
{
public:
muCastorMuDetDIGI();
virtual ~muCastorMuDetDIGI();
// -------> PUBLIC FUNCTIONS
virtual void Print(const Option_t* option = "") const;
// -------> SET METHODS
/// Set Det ID (Detector module)
void SetDetID(Int_t id) { fDetID = id; };
/// Set Layer ID (Layer [0,5])
void SetLayID(Int_t id) { fLayID = id; };
/// Set Tube ID (Tube inside each layer)
void SetTubID(Int_t id) { fTubID = id; };
void SetDistMC (Double_t v) { fDistMC = v; };
void SetDriftMC (Double_t v) { fDriftMC= v; };
void SetDist (Double_t v) { fDist = v; };
void SetDrift (Double_t v) { fDrift = v; };
// Set energy
void SetEnergy(Double_t e) { fEnergy = e; };
// -------> GET METHODS
/// \return The Module number
Int_t GetDetID() { return fDetID; };
/// \return The Layer number
Int_t GetLayID() { return fLayID; };
/// \return The Tube number
Int_t GetTubID() { return fTubID; };
Double_t GetDistMC() { return fDistMC; };
Double_t GetDriftMC() { return fDriftMC; };
Double_t GetDist() { return fDist; };
Double_t GetDrift() { return fDrift; };
/// \return Get energy
Double_t GetEnergy() { return fEnergy; };
// -------> PRIVATE VARIABLES
private:
Int_t fDetID; // Detector module ID
Int_t fLayID; // Detector layer ID
Int_t fTubID; // Layer tube ID
Double_t fDistMC; // Minimum distance of particle tracks to the wire
Double_t fDriftMC; // Minimum drift time to the wire
Double_t fDist; // Minimum distance of particle tracks to the wire (with smearing)
Double_t fDrift; // Minimum drift time to the wire (with smearing)
Double_t fEnergy; // Energy released in the element
ClassDef(muCastorMuDetDIGI,1) //muCastorMuDetDIGI
};
#endif //muCastorMuDetDIGI_H

View File

@@ -0,0 +1,47 @@
#include <iostream>
#include <limits>
#include "muCastorPrimaryVertex.h"
/// \cond CLASSIMP
ClassImp(muCastorPrimaryVertex)
/// \endcond
using namespace std;
//_____________________________________________________________________________
muCastorPrimaryVertex::muCastorPrimaryVertex() {
/// Default constructor
Reset();
}
//_____________________________________________________________________________
muCastorPrimaryVertex::~muCastorPrimaryVertex()
{
/// Destructor
}
//_____________________________________________________________________________
void muCastorPrimaryVertex::Reset()
{
fPdgCode = 0;
fVx = std::numeric_limits<double>::quiet_NaN();
fVy = std::numeric_limits<double>::quiet_NaN();
fVz = std::numeric_limits<double>::quiet_NaN();
fPx = std::numeric_limits<double>::quiet_NaN();
fPy = std::numeric_limits<double>::quiet_NaN();
fPz = std::numeric_limits<double>::quiet_NaN();
fE = std::numeric_limits<double>::quiet_NaN();
}
//_____________________________________________________________________________
void muCastorPrimaryVertex::Print(const Option_t* /*opt*/) const
{
/// Printing
cout << " Primary particle PDG Code " << fPdgCode << endl;
cout << " Vertex: (" << fVx << ", " << fVy << ", " << fVz << ") cm" << endl;
cout << " Mom: (" << fPx << ", " << fPy << ", " << fPz << ") MeV/c" << endl;
}

View File

@@ -0,0 +1,53 @@
#ifndef muCastor_PVTX_H
#define muCastor_PVTX_H
/// \brief Definition of the muCastorPrimaryVertex class
///
/// \authors G. Bonomi (04/02/2020)
#include <TObject.h>
class muCastorPrimaryVertex : public TObject
{
public:
muCastorPrimaryVertex();
virtual ~muCastorPrimaryVertex();
// -------> PUBLIC FUNCTIONS
virtual void Print(const Option_t* option = "") const;
// -------> SET METHODS
void SetPdgCode(Int_t code) { fPdgCode = code; };
void SetVx(Double_t Vx) { fVx = Vx; };
void SetVy(Double_t Vy) { fVy = Vy; };
void SetVz(Double_t Vz) { fVz = Vz; };
void SetPx(Double_t Px) { fPx = Px; };
void SetPy(Double_t Py) { fPy = Py; };
void SetPz(Double_t Pz) { fPz = Pz; };
void SetE(Double_t E) { fE = E; };
void Reset();
private:
// -------> PRIVATE VARIABLES
Int_t fPdgCode; // PDG code of the particle
Double_t fVx; // x of production vertex
Double_t fVy; // y of production vertex
Double_t fVz; // z of production vertex
Double_t fPx; // x component of momentum
Double_t fPy; // y component of momentum
Double_t fPz; // z component of momentum
Double_t fE; // Energy
ClassDef(muCastorPrimaryVertex,1) //muCastorPrimaryVertex
};
#endif //muCastor_PVTX_H

View File

@@ -0,0 +1,43 @@
//----------------------------------------------------------
// Class : CastorSkinHit
// Date: October 2020
// Author: Germano Bonomi germano.bonomi@unibs.it
//----------------------------------------------------------
#include <iostream>
#include "muCastorSkinHit.h"
/// \cond CLASSIMP
ClassImp(muCastorSkinHit)
/// \endcond
using namespace std;
//_____________________________________________________________________________
muCastorSkinHit::muCastorSkinHit() :
fDetID(-1),
fPdgCode(-1),
fMotherID(-1),
fMomX(0.),
fMomY(0.),
fMomZ(0.),
fPosX(0.),
fPosY(0.),
fPosZ(0.)
{}
//_____________________________________________________________________________
muCastorSkinHit::~muCastorSkinHit()
{}
//_____________________________________________________________________________
void muCastorSkinHit::Print(const Option_t* /*opt*/) const
{
cout << " detID: " << fDetID
<< " position (cm): ("
<< fPosX << ", " << fPosY << ", " << fPosZ << ")"
<< " momentum (MeV/c): ("
<< fMomX << ", " << fMomY << ", " << fMomZ << ")"
<< endl;
}

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@@ -0,0 +1,52 @@
//----------------------------------------------------------
// Class : CastorSkinHit
// Date: October 2020
// Author: Germano Bonomi germano.bonomi@unibs.it
//----------------------------------------------------------
#ifndef muCastor_SKINHIT_H
#define muCastor_SKINHIT_H
#include <TObject.h>
#include <TVector3.h>
class muCastorSkinHit : public TObject
{
public:
muCastorSkinHit();
virtual ~muCastorSkinHit();
// methods
virtual void Print(const Option_t* option = "") const;
// set methods
void SetDetID(Int_t id) { fDetID = id; };
void SetPdgCode(Int_t pdg) { fPdgCode = pdg; };
void SetMotherID(Int_t mid) { fMotherID = mid; };
void SetMom(TVector3 xyz) { fMomX = xyz.X(); fMomY = xyz.Y(); fMomZ = xyz.Z(); };
void SetPos(TVector3 xyz) { fPosX = xyz.X(); fPosY = xyz.Y(); fPosZ = xyz.Z(); };
Int_t GetDetID() { return fDetID; }
Int_t GetPdgCode() { return fPdgCode; }
Int_t GetMotherID() { return fMotherID; }
TVector3 GetMom() { return TVector3(fMomX, fMomY, fMomZ); }
TVector3 GetPos() { return TVector3(fPosX, fPosY, fPosZ); }
private:
Int_t fDetID; // Detector module ID
Int_t fPdgCode; // Particle PDG Code
Int_t fMotherID; // Particle mother ID (-1 = primary, 0 = secondary, etc..)
Double_t fMomX; // Track momentum when releasing the hit (X)
Double_t fMomY; // Track momentum when releasing the hit (Y)
Double_t fMomZ; // Track momentum when releasing the hit (Z)
Double_t fPosX; // Hit coordinates (at the entrance of the detector) (X)
Double_t fPosY; // Hit coordinates (at the entrance of the detector) (Y)
Double_t fPosZ; // Hit coordinates (at the entrance of the detector) (Z)
ClassDef(muCastorSkinHit,1) //muCastorSkinHit
};
#endif //muCastort_SKINHIT_H

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@@ -1,37 +1,38 @@
set(HEADERS
uLibVtkInterface.h
uLibVtkViewer.h
vtkContainerBox.h
vtkMuonScatter.h
vtkStructuredGrid.h
vtkVoxRaytracerRepresentation.h
vtkVoxImage.h
# vtkHLineRepresentation.h
# vtkTriangleMesh.h
)
set(HEADERS uLibVtkInterface.h
uLibVtkViewer.h
vtkContainerBox.h
vtkMuonScatter.h
vtkStructuredGrid.h
vtkVoxRaytracerRepresentation.h
vtkVoxImage.h)
SET(SOURCES
uLibVtkInterface.cxx
uLibVtkViewer.cpp
vtkContainerBox.cpp
vtkMuonScatter.cxx
vtkStructuredGrid.cpp
vtkVoxRaytracerRepresentation.cpp
vtkVoxImage.cpp
)
set(SOURCES uLibVtkInterface.cxx
uLibVtkViewer.cpp
vtkContainerBox.cpp
vtkMuonScatter.cxx
vtkStructuredGrid.cpp
vtkVoxRaytracerRepresentation.cpp
vtkVoxImage.cpp)
set(LIBRARIES
${Boost_SERIALIZATION_LIBRARY}
${Boost_SIGNALS_LIBRARY}
${Boost_PROGRAM_OPTIONS_LIBRARY}
${Eigen_LIBRARY}
${ROOT_LIBRARIES}
${Geant4_LIBRARIES}
${VTK_LIBRARIES}
${PACKAGE_LIBPREFIX}Core
${PACKAGE_LIBPREFIX}Math
)
set(LIBRARIES Eigen3::Eigen
${ROOT_LIBRARIES}
${VTK_LIBRARIES}
${PACKAGE_LIBPREFIX}Math)
uLib_add_shared_library(${uLib-module})
set(libname ${PACKAGE_LIBPREFIX}Vtk)
set(ULIB_SHARED_LIBRARIES ${ULIB_SHARED_LIBRARIES} ${libname} PARENT_SCOPE)
set(ULIB_SELECTED_MODULES ${ULIB_SELECTED_MODULES} Vtk PARENT_SCOPE)
add_library(${libname} SHARED ${SOURCES})
set_target_properties(${libname} PROPERTIES
VERSION ${PROJECT_VERSION}
SOVERSION ${PROJECT_SOVERSION})
target_link_libraries(${libname} ${LIBRARIES})
install(TARGETS ${libname}
EXPORT "${PROJECT_NAME}Targets"
RUNTIME DESTINATION ${INSTALL_BIN_DIR} COMPONENT bin
LIBRARY DESTINATION ${INSTALL_LIB_DIR} COMPONENT lib)
install(FILES ${HEADERS} DESTINATION ${INSTALL_INC_DIR}/Vtk)
add_subdirectory(testing)

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@@ -37,7 +37,7 @@
#endif
#include <vtkConfigure.h>
#include <vtkVersion.h>
#include <vtkProp.h>
#include <vtkActor.h>
#include <vtkSmartPointer.h>

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@@ -65,6 +65,7 @@ vtkContainerBox::~vtkContainerBox()
vtkPolyData *vtkContainerBox::GetPolyData() const
{
// TODO
return NULL;
}
void vtkContainerBox::InstallPipe()

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@@ -28,7 +28,7 @@
#ifndef VTKMUONSCATTER_H
#define VTKMUONSCATTER_H
#include <vtkConfigure.h>
#include <vtkVersion.h>
#include <vtkSmartPointer.h>
#include <vtkSphereSource.h>
#include <vtkAppendPolyData.h>

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@@ -28,11 +28,11 @@
#ifndef U_VTKVOXIMAGE_H
#define U_VTKVOXIMAGE_H
#include "vtk/vtkVolume.h"
#include "vtk/vtkImageData.h"
#include "vtk/vtkXMLImageDataReader.h"
#include "vtk/vtkXMLImageDataWriter.h"
#include "vtk/vtkCubeSource.h"
#include <vtkVolume.h>
#include <vtkImageData.h>
#include <vtkXMLImageDataReader.h>
#include <vtkXMLImageDataWriter.h>
#include <vtkCubeSource.h>
#include <Math/VoxImage.h>

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@@ -1,35 +0,0 @@
/*//////////////////////////////////////////////////////////////////////////////
// CMT Cosmic Muon Tomography project //////////////////////////////////////////
////////////////////////////////////////////////////////////////////////////////
Copyright (c) 2014, Universita' degli Studi di Padova, INFN sez. di Padova
All rights reserved
Authors: Andrea Rigoni Garola < andrea.rigoni@pd.infn.it >
------------------------------------------------------------------
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 3.0 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library.
//////////////////////////////////////////////////////////////////////////////*/
#include "Object.h"
int main()
{
return 0;
}

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@@ -30,7 +30,6 @@ src/Core/testing/Flags.h
src/Core/testing/ObjectCopyTest.cpp
src/Core/testing/ObjectFlagsTest.cpp
src/Core/testing/ObjectParametersTest.cpp
src/Core/testing/ObjectPropableTest.cpp
src/Core/testing/OptionsTest.cpp
src/Core/testing/PropertiesTest.cpp
src/Core/testing/SerializeDreadDiamondTest.cpp
@@ -59,7 +58,6 @@ src/Core/Macros.h
src/Core/Mpl.h
src/Core/Object.cpp
src/Core/Object.h
src/Core/ObjectProps.h
src/Core/Options.cpp
src/Core/Options.h
src/Core/Serializable.cpp

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@@ -1,19 +1,92 @@
# - Config file for the FooBar package
# - Config file for the ULib package
# It defines the following variables
# FOOBAR_INCLUDE_DIRS - include directories for FooBar
# FOOBAR_LIBRARIES - libraries to link against
# FOOBAR_EXECUTABLE - the bar executable
# ULIB_INCLUDE_DIRS - include directories for ULib
# ULIB_LIBRARIES - libraries to link against
# ULIB_EXECUTABLE - the bar executable
set(ULIB_VERSION @PROJECT_VERSION@)
@PACKAGE_INIT@
# Defines the include directories for the header files
# PACKAGE_INCLUDE_INSTALL_DIR is replaced by configure_package_config_file
# with the correct path for the installation.
set(ULIB_INCLUDE_DIRS "${PACKAGE_INCLUDE_INSTALL_DIR}")
# Compute paths
get_filename_component(ULIB_CMAKE_DIR "${CMAKE_CURRENT_LIST_FILE}" PATH)
set(ULIB_INCLUDE_DIRS "@CONF_INCLUDE_DIRS@")
# Our library dependencies (contains definitions for IMPORTED targets)
# if(NOT TARGET foo AND NOT FooBar_BINARY_DIR)
include("${ULIB_CMAKE_DIR}/uLibTargets.cmake")
# endif()
# Search for the directory of exported build targets
set(uLib_BUILD_TARGETS_FILE
"${ULIB_CMAKE_DIR}/uLibTargets-build.cmake"
)
# Search for the directory of installed targets
set(uLib_INSTALL_TARGETS_FILE
"${ULIB_CMAKE_DIR}/uLibTargets.cmake"
)
# We use a logic based on the presence of the build target file
# to determine if we are in a local build.
if(EXISTS "${uLib_BUILD_TARGETS_FILE}")
message(STATUS " ++ Using uLib build targets")
include("${uLib_BUILD_TARGETS_FILE}")
set_and_check(ULIB_INCLUDE_DIRS "@ULIB_SOURCE_DIR@/src")
set_and_check(ULIB_LIBRARY_DIRS "${ULIB_CMAKE_DIR}")
set(ULIB_BUILD_DIR ${ULIB_CMAKE_DIR})
# Target that builds uLib inside its build directory
add_custom_target(uLib_dependency_target
COMMAND echo " --------------------------------- "
COMMAND echo " - Building uLib as a dependency - "
COMMAND echo " --------------------------------- "
COMMAND echo ""
COMMAND ${CMAKE_COMMAND} --build ${ULIB_BUILD_DIR}
COMMAND echo ""
WORKING_DIRECTORY ${ULIB_BUILD_DIR}
)
add_library(uLib_dependency INTERFACE)
add_dependencies(uLib_dependency uLib_dependency_target)
link_libraries(uLib_dependency)
else()
message(STATUS " ++ Using uLib installed targets")
include("${uLib_INSTALL_TARGETS_FILE}")
set_and_check(ULIB_INCLUDE_DIRS "@PACKAGE_INSTALL_INC_DIR@")
set(ULIB_SYSCONFIG_DIR "@PACKAGE_INSTALL_ETC_DIR@")
set_and_check(ULIB_CMAKE_DIR "@PACKAGE_INSTALL_CMAKE_DIR@")
set_and_check(ULIB_LIBRARY_DIRS "@PACKAGE_INSTALL_LIB_DIR@")
endif()
# --- Add required packages from uLib ---
# TODO: this should be selected if components are active
#
set(Boost_USE_STATIC_LIBS OFF)
set(Boost_USE_MULTITHREADED ON)
set(Boost_USE_STATIC_RUNTIME OFF)
find_package(Boost 1.45.0 COMPONENTS program_options filesystem REQUIRED)
include_directories(${Boost_INCLUDE_DIRS})
link_libraries(${Boost_LIBRARIES})
find_package(Eigen3 CONFIG REQUIRED)
include(${EIGEN3_USE_FILE})
find_package(ROOT CONFIG REQUIRED)
include(${ROOT_USE_FILE})
find_package(VTK REQUIRED)
# include(${VTK_USE_FILE})
link_directories("${ULIB_LIBRARY_DIRS}")
set(ULIB_LIBRARIES "@ULIB_SHARED_LIBRARIES@")
check_required_components(uLib)
# Set the variable to indicate that the package has been found.
set(uLib_FOUND TRUE)
# These are IMPORTED targets created by FooBarTargets.cmake
# set(FOOBAR_LIBRARIES foo)
# set(FOOBAR_EXECUTABLE bar)
set(ULIB_LIBRARIES @ULIB_SHARED_LIBRARIES@)